{"batchcomplete":"","continue":{"lecontinue":"20260430055134|3632","continue":"-||"},"query":{"logevents":[{"logid":3642,"ns":0,"title":"2026Behkamal Secondary","pageid":3140,"logpage":3140,"revid":5220,"params":{},"type":"create","action":"create","user":"WikiSysop","timestamp":"2026-06-02T06:58:01Z","comment":"Created page with \"== Citation ==  Behkamal, B., Etemadheravi, M.P., Mahmoodjanloo, A., Mansoori, A., Naghibzadeh, M., Al Nasr, K. and Saberi, M.R. 2026. A Novel Machine-Learning Based Method for Resolving Secondary Structure Topology in Medium-Resolution Cryo-EM Density Maps. Intl. J. of Molecular Sciences. 27, 10 (2026), 4388.  == Abstract ==  Medium-resolution cryo-electron microscopy (cryo-EM) density maps preserve substantial information about protein secondary-structure organization;...\""},{"logid":3641,"ns":0,"title":"2026Kwon Elastic","pageid":3139,"logpage":3139,"revid":5218,"params":{},"type":"create","action":"create","user":"WikiSysop","timestamp":"2026-06-02T06:16:17Z","comment":"Created page with \"== Citation ==  Kwon, M.C. and Abrahams, J.P. 2026. Elastic and Inelastic Interactions of Electrons in Transmission Electron Microscopy. Ultramicroscopy. (2026), 114383.  == Abstract ==  High-energy electrons passing through a sample in a transmission electron microscope carry structural information through their interactions with the sample\u2019s atoms. Elastically scattered electrons, which undergo no significant energy loss, convey spatial details in their scattering an...\""},{"logid":3640,"ns":0,"title":"2026Obrien CryoJax","pageid":3138,"logpage":3138,"revid":5216,"params":{},"type":"create","action":"create","user":"WikiSysop","timestamp":"2026-05-26T05:54:56Z","comment":"Created page with \"== Citation ==  O\u2019Brien, M.J., Silva-S\u00e1nchez, D., Woollard, G., Je, K., Hanson, S.M., Needleman, D.J., Cossio, P., Thiede, E.H. and Astore, M.A. 2026. CryoJAX: a cryo-electron microscopy image-simulation library in JAX. Acta Crystallographica Sec. D. 82, 3 (2026).  == Abstract ==  While cryo-electron microscopy (cryo-EM) has come to prominence in the last decade due to its ability to resolve biomolecular complexes at atomic resolution, advancements in experimental and...\""},{"logid":3639,"ns":0,"title":"2025Evans LowDim","pageid":3137,"logpage":3137,"revid":5214,"params":{},"type":"create","action":"create","user":"WikiSysop","timestamp":"2026-05-25T06:06:43Z","comment":"Created page with \"== Citation ==  Evans, L., Murad, O.-V., Dingeldein, L., Cossio, P., Covino, R. and Meila, M. 2025. Cryo-EM images are intrinsically low dimensional. PRX Life. 3, 3 (2025), 33025.  == Abstract ==  Simulation-based inference provides a powerful framework for cryoelectron microscopy, employing neural networks in methods like CryoSBI to infer biomolecular conformations via learned latent representations. This latent space represents a rich opportunity, encoding valuable inf...\""},{"logid":3638,"ns":0,"title":"2026Silva CryoJax","pageid":3136,"logpage":3136,"revid":5212,"params":{},"type":"create","action":"create","user":"WikiSysop","timestamp":"2026-05-22T06:32:18Z","comment":"Created page with \"== Citation ==  Silva-S\u00e1nchez, D., Berezuk, A.M., Zhu, X., Thiede, E.H., Lederman, R.R. and Cossio, P. 2026. Cryo-Electron Microscopy Structural Ensemble Optimization Using Individual Particles. J. of Chemical Theory and Computation. (2026).  == Abstract ==  Biomolecules are inherently dynamic, transitioning between various conformational states to execute their biological functions; consequently, characterizing their ensemble distributions (the population of these conf...\""},{"logid":3637,"ns":0,"title":"2026Premaraj DualJet","pageid":3135,"logpage":3135,"revid":5208,"params":{},"type":"create","action":"create","user":"WikiSysop","timestamp":"2026-05-13T06:52:42Z","comment":"Created page with \"== Citation ==  Premaraj, N., Huysmans, P., Ploum, M., Schijns, L., Peters, P.J., L\u00f3pez-Iglesias, C., Ravelli, R.B. and Knoops, K. 2026. An experimental platform for exploring dual-jet vitrification mechanisms in cryo-EM sample preparation. Methods in Microscopy. 0 (2026).  == Abstract ==  Jet vitrification harnesses the exceptionally high cooling potential of rapidly moving liquid cryogens to achieve ultrafast sample freezing with superior cooling efficiency. Building...\""},{"logid":3636,"ns":0,"title":"2026Thibodeaux MR","pageid":3134,"logpage":3134,"revid":5205,"params":{},"type":"create","action":"create","user":"WikiSysop","timestamp":"2026-05-13T05:45:10Z","comment":"Created page with \"== Citation ==  Thibodeaux, A., Bu, G., Edwards, L.C. and Rova Danelius, E. 2026. High-throughput automated molecular replacement for small-molecule MicroED data. IUCrJ. 13, 3 (2026).  == Abstract ==  Interest in electron diffraction (ED) for structural characterization of both proteins and small molecules has grown significantly over the last decade. While ab initio phasing methods remain the gold standard for ED data from smallmolecule samples, radiation beam damage du...\""},{"logid":3635,"ns":0,"title":"2025Hu Denoising","pageid":3133,"logpage":3133,"revid":5203,"params":{},"type":"create","action":"create","user":"WikiSysop","timestamp":"2026-05-04T08:36:18Z","comment":"Created page with \"== Citation ==  Hu, B., Zhang, D.-X., Liu, S.-Q., Xie, X.-L., Zhou, X.-H., Li, H.-J., Zheng, Q.-B., Zhang, F., Hou, Z.-G. and Xia, N.-S. 2025. Particle Restoration: A Novel Image Processing Framework for Improving Real Cryo-EM Image Quality in Single Particle Analysis. IEEE Trans. on Computational Biology and Bioinformatics. (2025).  == Abstract ==  Cryo-electron microscopy single particle analysis (cryo-EM SPA) is the most powerful technique for biomacromolecule structu...\""},{"logid":3634,"ns":0,"title":"2025Costa PERC","pageid":3132,"logpage":3132,"revid":5201,"params":{},"type":"create","action":"create","user":"WikiSysop","timestamp":"2026-04-30T06:51:09Z","comment":"Created page with \"== Citation ==  Costa-Gomes, B., Greer, J., Juraschko, N., Parkhurst, J., Mirecka, J., Famili, M., Rangel-Smith, C., Strickson, O., Lowe, A., Basham, M. and others 2025. PERC: a suite of software tools for the curation of cryoEM data with application to simulation, modeling and machine learning. Structural Biology and Crystallization Communications. 81, 10 (2025).  == Abstract ==  Ease of access to data, tools and models expedites scientific research. In structural biolo...\""},{"logid":3633,"ns":0,"title":"2025Giri Sharpening","pageid":3131,"logpage":3131,"revid":5199,"params":{},"type":"create","action":"create","user":"WikiSysop","timestamp":"2026-04-30T06:42:34Z","comment":"Created page with \"== Citation ==  Giri, N., Chen, X., Wang, L. and Cheng, J. 2025. A labeled dataset for AI-based cryo-EM map enhancement. Computational and Structural Biotechnology Journal. 27, (2025), 2843\u20132850.  == Abstract ==  Cryogenic electron microscopy (cryo-EM) has transformed structural biology by enabling near atomic resolution imaging of macromolecular complexes. However, cryo-EM density maps suffer from intrinsic noise arising from structural sources, shot noise, and digita...\""}]}}