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WikiSysop: /* 2D Preprocessing */

2026-09-18T05:06:50Z

2D Preprocessing

← Older revision		Revision as of 05:06, 18 September 2026
Line 2,097:		Line 2,097:
	\| [[2025Starynska_Membrane]]		\| [[2025Starynska_Membrane]]
	\| Membrane detection and substraction from micrographs		\| Membrane detection and substraction from micrographs
			\|-

			\| Paper
			\| [[2026Burton_PASR]]
			\| Post-acquisition Super Resolution
	\|-		\|-

2026-09-17T05:53:25Z

Books and reviews

← Older revision		Revision as of 05:53, 17 September 2026
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	\| [[2026Gauvin_200kV]]		\| [[2026Gauvin_200kV]]
	\| Example of a 200kV CryoEM facility and discussion of its cost		\| Example of a 200kV CryoEM facility and discussion of its cost
			\|-

			\| Paper
			\| [[2026Klaholz_Concepts]]
			\| Review of cryoEM related concepts
	\|-		\|-

2026-09-15T09:14:46Z

Databases

← Older revision		Revision as of 09:14, 15 September 2026
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	\| [[2025Giri_Sharpening]]		\| [[2025Giri_Sharpening]]
	\| A labeled dataset for map enhancement		\| A labeled dataset for map enhancement
			\|-

			\| Paper
			\| [[2025Xu_CryoDataBot]]
			\| Automatic construction of map datasets
	\|-		\|-

2026-09-03T05:56:45Z

Automatic particle picking

← Older revision		Revision as of 05:56, 3 September 2026
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	\| [[2026He_prismPYP]]		\| [[2026He_prismPYP]]
	\| prismPYP: Power-spectrum and image domain learning for self-supervised micrograph evaluation		\| prismPYP: Power-spectrum and image domain learning for self-supervised micrograph evaluation
			\|-

			\| Paper
			\| [[2026Sun_QwenCryoMarker]]
			\| QwenCryoMarker: Identification of contamination in micrographs
	\|-		\|-

2026-08-31T04:36:40Z

3D Reconstruction

← Older revision		Revision as of 04:36, 31 August 2026
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	\| [[2026Chen_MPM]]		\| [[2026Chen_MPM]]
	\| Masked projection modelling for 3D reconstruction		\| Masked projection modelling for 3D reconstruction
			\|-

			\| Paper
			\| [[2026Kreymer_EM]]
			\| Expectation-Maximization reconstruction directly from micrographs
	\|-		\|-

2026-08-24T05:11:10Z

Fitting and docking

← Older revision		Revision as of 05:11, 24 August 2026
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	\| [[2026Fadini_Rocket]]		\| [[2026Fadini_Rocket]]
	\| Rocket: AlphaFold as a prior to model cryoEM maps		\| Rocket: AlphaFold as a prior to model cryoEM maps
			\|-

			\| Paper
			\| [[2026Jain_ProtAcid]]
			\| CryoZETA and ComplexModeler for modelling protein and nucleic acids in cryoEM maps
	\|-		\|-

2026-08-21T05:36:37Z

2D Classification and clustering

← Older revision		Revision as of 05:36, 21 August 2026
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	\| [[2025Bai_NUDFT]]		\| [[2025Bai_NUDFT]]
	\| 2D Classification in SPA using the Non-uniform DFT		\| 2D Classification in SPA using the Non-uniform DFT
			\|-

			\| Paper
			\| [[2025Schafer_CryoSift]]
			\| CryoSift: automatic selection of 2D classes
	\|-		\|-

2026-08-21T05:29:00Z

Fitting and docking

← Older revision		Revision as of 05:29, 21 August 2026
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	\| [[2025Shub_Mic]]		\| [[2025Shub_Mic]]
	\| Mic: a deep learning algorithm to assign ions and waters in SPA maps		\| Mic: a deep learning algorithm to assign ions and waters in SPA maps
			\|-

			\| Paper
			\| [[2025Shugaeva_Prior]]
			\| Atomic modelling exploiting multiple AlphaFold2 predicted conformations
	\|-		\|-

2026-08-21T05:20:46Z

Fitting and docking

← Older revision		Revision as of 05:20, 21 August 2026
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	\| [[2025Wang_E3CryoFold]]		\| [[2025Wang_E3CryoFold]]
	\| E3CryoFold: model building in cryoEM maps		\| E3CryoFold: model building in cryoEM maps
			\|-

			\| Paper
			\| [[2025Zhang_Benchmark]]
			\| Benchmarking multiple algorithms to compute an atomic model from a cryoEM map
	\|-		\|-

Line 5,084:		Line 5,089:

	\| Paper		\| Paper
	\| [[~~2025Zhang_Benchmark~~]]		\| [[2025Zhang_Struct2MapGAN]]
	\| ~~Benchmarking multiple algorithms to compute an~~ atomic ~~model from a cryoEM map~~		\| Struct2MapGAN: Simulation of cryoEM maps from atomic structures
	\|-		\|-

2026-08-21T05:10:32Z

Books and reviews

← Older revision		Revision as of 05:10, 21 August 2026
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	\| [[2026Subramaniam_Review]]		\| [[2026Subramaniam_Review]]
	\| Review on the general state of cryoEM		\| Review on the general state of cryoEM
			\|-

			\| Paper
			\| [[2026Wankowicz_Atomic]]
			\| Review on ensemble modelling
	\|-		\|-