User contributions
From 3DEM-Methods
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- 08:22, 22 September 2023 (diff | hist) . . (+1,504) . . N 2023Maddhuri EMGan (Created page with "== Citation == Maddhuri Venkata Subramaniya, Sai Raghavendra / Terashi, Genki / Kihara, Daisuke. Enhancing cryo-EM maps with 3D deep generative networks for assisting protein...") (current)
- 08:12, 22 September 2023 (diff | hist) . . (+74) . . Main Page (→Sharpening of high resolution information) (current)
- 08:08, 21 September 2023 (diff | hist) . . (+1,775) . . N 2023Blau FittingML (Created page with "== Citation == Blau, Christian / Yvonnesdotter, Linnea / Lindahl, Erik. Gentle and fast all-atom model refinement to cryo-EM densities via a maximum likelihood approach. 2023...") (current)
- 08:07, 21 September 2023 (diff | hist) . . (+96) . . Main Page (→Fitting and docking)
- 07:59, 21 September 2023 (diff | hist) . . (+1,453) . . N 2023Tang Conformational (Created page with "== Citation == Tang, Wai Shing / Zhong, Ellen D. / Hanson, Sonya M. / Thiede, Erik H. / Cossio, Pilar. Conformational heterogeneity and probability distributions from single-...") (current)
- 07:58, 21 September 2023 (diff | hist) . . (+113) . . Main Page (→Books and reviews)
- 07:51, 21 September 2023 (diff | hist) . . (+1,608) . . N 2023Short MRC2020 (Created page with "== Citation == Short, J. M. / Palmer, C. M. / Burnley, T. / Winn, M. D. / Zhang, Q. / Venkataram Prasad, B. V. / Chen, S. / Crowther, R. A. / Unwin, P. N. T. / Henderson, R....") (current)
- 07:50, 21 September 2023 (diff | hist) . . (+110) . . Main Page (→Software)
- 06:38, 20 September 2023 (diff | hist) . . (+2,741) . . N 2023Conesa Scipion3 (Created page with "== Citation == Conesa, Pablo / Fonseca, Yunior C. / de la Morena, Jorge Jiménez / Sharov, Grigory / de la Rosa-Trev\in, Jose Miguel / Cuervo, Ana / Mena, Alberto Garc\ia / d...") (current)
- 06:35, 20 September 2023 (diff | hist) . . (+80) . . Main Page (→Software)
- 06:12, 20 September 2023 (diff | hist) . . (+1,571) . . N 2023Genthe PickYolo (Created page with "== Citation == Genthe, Erik / Miletic, Sean / Tekkali, Indira / James, Rory Hennell / Marlovits, Thomas C. / Heuser, Philipp. PickYOLO: Fast deep learning particle detector f...") (current)
- 06:10, 20 September 2023 (diff | hist) . . (+73) . . Main Page (→Subtomogram analysis)
- 07:07, 14 September 2023 (diff | hist) . . (+1,799) . . N 2023Vuillemot MDTOMO (Created page with "== Citation == Vuillemot, Rémi / Rouiller, Isabelle / Jonić, Slavica. MDTOMO method for continuous conformational variability analysis in cryo electron subtomograms based o...") (current)
- 07:06, 14 September 2023 (diff | hist) . . (+109) . . Main Page (→Molecular 3D dynamics)
- 08:59, 13 September 2023 (diff | hist) . . (+1,635) . . N 2023Dhakal CryoPPP (Created page with "== Citation == Dhakal, Ashwin / Gyawali, Rajan / Wang, Liguo / Cheng, Jianlin. A large expert-curated cryo-EM image dataset for machine learning protein particle picking. 202...") (current)
- 08:54, 13 September 2023 (diff | hist) . . (+79) . . Main Page (→Automatic particle picking)
- 08:45, 13 September 2023 (diff | hist) . . (-118) . . Main Page (→Fitting and docking)
- 08:43, 13 September 2023 (diff | hist) . . (+118) . . Main Page (→Fitting and docking)
- 07:14, 11 September 2023 (diff | hist) . . (+1,613) . . N 2023Herreros Hub (Created page with "== Citation == Herreros, D. / Krieger, J. M. / Fonseca, Y. / Conesa, P. / Harastani, M. / Vuillemot, R. / Hamitouche, I. / Serrano Gutiérrez, R. / Gragera, M. / Melero, R. /...") (current)
- 07:14, 11 September 2023 (diff | hist) . . (+108) . . Main Page (→3D Heterogeneity)
- 16:22, 7 September 2023 (diff | hist) . . (+1,913) . . N 2017Barnett Marching (Created page with "== Citation == Barnett, Alex / Greengard, Leslie / Pataki, Andras / Spivak, Marina. Rapid solution of the cryo-EM reconstruction problem by frequency marching. 2017. SIAM J....") (current)
- 16:21, 7 September 2023 (diff | hist) . . (+84) . . Main Page (→3D Reconstruction)
- 12:17, 6 September 2023 (diff | hist) . . (+1,512) . . N 2023Seitz ESPER (Created page with "== Citation == Seitz, Evan / Acosta-Reyes, Francisco / Maji, Suvrajit / Schwander, Peter / Frank, Joachim. Recovery of conformational continuum from single-particle Cryo-EM i...") (current)
- 12:12, 6 September 2023 (diff | hist) . . (+131) . . Main Page (→3D Heterogeneity)
- 12:03, 6 September 2023 (diff | hist) . . (+1,670) . . N 2023Dsouza benchmark (Created page with "== Citation == Dsouza, Raison / Mashayekhi, Ghoncheh / Etemadpour, Roshanak / Schwander, Peter / Ourmazd, Abbas. Energy landscapes from cryo-EM snapshots: a benchmarking stud...") (current)
- 12:01, 6 September 2023 (diff | hist) . . (+108) . . Main Page (→3D Heterogeneity)
- 11:55, 6 September 2023 (diff | hist) . . (+1,698) . . N 2008Orzechowski Flexible (Created page with "== Citation == Orzechowski, Marek / Tama, Florence. Flexible fitting of high-resolution x-ray structures into cryoelectron microscopy maps using biased molecular dynamics sim...") (current)
- 11:51, 6 September 2023 (diff | hist) . . (+94) . . Main Page (→Fitting and docking)
- 12:15, 1 September 2023 (diff | hist) . . (+1,605) . . N 2023He EMReady (Created page with "== Citation == He, Jiahua / Li, Tao / Huang, Sheng-You. Improvement of cryo-EM maps by simultaneous local and non-local deep learning. 2023. Nature Communications, Vol. 14, N...") (current)
- 12:14, 1 September 2023 (diff | hist) . . (+101) . . Main Page (→Sharpening of high resolution information)
- 16:03, 31 August 2023 (diff | hist) . . (+866) . . N 2023Vilas FSO (Created page with "== Citation == Vilas, Jose-Luis / Tagare, Hemant D. New measures of anisotropy of cryo-EM maps. 2023. Nature Methods, 20, p. 1021-1024 == Abstract == We propose two new me...") (current)
- 16:02, 31 August 2023 (diff | hist) . . (+81) . . Main Page (→Resolution)
- 15:59, 31 August 2023 (diff | hist) . . (+1,598) . . N 2023Zhang REST (Created page with "== Citation == Zhang, Haonan / Li, Yan / Liu, Yanan / Li, Dongyu / Wang, Lin / Song, Kai / Bao, Keyan / Zhu, Ping. A method for restoring signals and revealing individual mac...") (current)
- 15:57, 31 August 2023 (diff | hist) . . (+81) . . Main Page (→Missing-wedge correction)
- 10:14, 30 August 2023 (diff | hist) . . (+1,417) . . N 2023Reggiano MEDIC (Created page with "== Citation == Reggiano, Gabriella / Lugmayr, Wolfgang / Farrell, Daniel / Marlovits, Thomas C. / DiMaio, Frank. Residue-level error detection in cryoelectron microscopy mode...") (current)
- 10:12, 30 August 2023 (diff | hist) . . (+80) . . Main Page (→Fitting and docking)
- 06:57, 29 August 2023 (diff | hist) . . (+1,529) . . N 2023Chang CryoFold (Created page with "== Citation == Chang, Liwei / Mondal, Arup / MacCallum, Justin L. / Perez, Alberto. CryoFold 2.0: Cryo-EM Structure Determination with MELD. 2023. The J. of Physical Chemistr...") (current)
- 06:57, 29 August 2023 (diff | hist) . . (+106) . . Main Page (→Fitting and docking)
- 06:45, 28 August 2023 (diff | hist) . . (+2,300) . . N 2023Matsumoto DEFmap (Created page with "== Citation == Matsumoto, Shigeyuki / Ishida, Shoichi / Terayama, Kei / Okuno, Yasuhshi. Quantitative analysis of protein dynamics using a deep learning technique combined wi...") (current)
- 06:44, 28 August 2023 (diff | hist) . . (0) . . Main Page (→3D Heterogeneity)
- 06:43, 28 August 2023 (diff | hist) . . (+114) . . Main Page (→3D Heterogeneity)
- 06:35, 28 August 2023 (diff | hist) . . (+1,521) . . N 2023Punjani 3DFlex (Created page with "== Citation == Punjani, Ali / Fleet, David J. 3DFlex: determining structure and motion of flexible proteins from cryo-EM. 2023. Nature Methods, Vol. 20, p. 860-870 == Abstr...") (current)
- 06:34, 28 August 2023 (diff | hist) . . (+80) . . Main Page (→3D Heterogeneity)
- 06:27, 28 August 2023 (diff | hist) . . (+2,343) . . N 2023Wang Autoencoder (Created page with "== Citation == Wang, Xiangwen / Lu, Yonggang / Lin, Xianghong / Li, Jianwei / Zhang, Zequn. An Unsupervised Classification Algorithm for Heterogeneous Cryo-EM Projection Imag...") (current)
- 06:26, 28 August 2023 (diff | hist) . . (+87) . . Main Page (→3D Heterogeneity)
- 06:50, 25 August 2023 (diff | hist) . . (+2,707) . . N 2023Bromberg Complex (Created page with "== Citation == Bromberg, Raquel / Guo, Yirui / Borek, Dominika / Otwinowski, Zbyszek. CryoEM single particle reconstruction with a complex-valued particle stack. 2023. J. Str...") (current)
- 06:49, 25 August 2023 (diff | hist) . . (+102) . . Main Page (→Image formation)
- 05:49, 25 August 2023 (diff | hist) . . (+2,170) . . N 2023Last Ice (Created page with "== Citation == Last, Mart G. F. / Voortman, Lenard M. / Sharp, Thomas H. Measuring cryo-TEM sample thickness using reflected light microscopy and machine learning. 2023. J. S...") (current)
- 05:47, 25 August 2023 (diff | hist) . . (+106) . . Main Page (→Automated data collection)
- 06:04, 24 August 2023 (diff | hist) . . (+1,209) . . N 2023Chen GMM (Created page with "== Citation == Chen, Muyuan / Toader, Bogdan / Lederman, Roy. Integrating molecular models into CryoEM heterogeneity analysis using scalable high-resolution deep Gaussian mix...") (current)
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