User contributions for CoSS

3 January 2017

• 06:0606:06, 3 January 2017 diff hist −1 2016Cossio BayesianGPU →Abstract current
• 06:0506:05, 3 January 2017 diff hist +1,604 N 2016Cossio BayesianGPU Created page with "== Citation == Cossio, P.; Rohr, D.; Baruffa, F.; Rampp, M.; Lindenstruth, V. & Hummer, G. BioEM: GPU-accelerated computing of Bayesian inference of electron microscopy image..."
• 06:0406:04, 3 January 2017 diff hist +106 Main Page →3D Alignment
• 05:5305:53, 3 January 2017 diff hist +1,741 N 2016Guay Compressed Created page with "== Citation == Guay, M. D.; Czaja, W.; Aronova, M. A. & Leapman, R. D. Compressed Sensing Electron Tomography for Determining Biological Structure. Scientific reports, 2016,..." current
• 05:4805:48, 3 January 2017 diff hist +84 Main Page →3D reconstruction

21 December 2016

• 20:4320:43, 21 December 2016 diff hist +1,074 N 2012Zheng Covariance Created page with "== Citation == Zheng, Y.; Wang, Q. & Doerschuk, P. C. Three-dimensional reconstruction of the statistics of heterogeneous objects from a collection of one projection image of..." current
• 20:4120:41, 21 December 2016 diff hist +78 Main Page →3D Heterogeneity

14 November 2016

• 06:4506:45, 14 November 2016 diff hist +1,396 N 2016Singharoy MDFF Created page with "== Citation == Singharoy, A.; Teo, I.; McGreevy, R.; Stone, J. E.; Zhao, J. & Schulten, K. Molecular Dynamics-based refinement and validation for sub-5 Å cryo-electron micro..." current
• 06:3906:39, 14 November 2016 diff hist +114 Main Page →Fitting and docking
• 06:2306:23, 14 November 2016 diff hist +5 Main Page →Segmentation
• 06:2306:23, 14 November 2016 diff hist +1,451 N 2015Xu TemplateMatching Created page with "== Citation == Xu, X.-P.; Page, C. & Volkmann, N. Efficient Extraction of Macromolecular Complexes from Electron Tomograms Based on Reduced Representation Templates Intl. Con..." current
• 06:2206:22, 14 November 2016 diff hist +132 Main Page →Segmentation

8 November 2016

• 14:3814:38, 8 November 2016 diff hist +91 Main Page →Online courses

31 October 2016

• 08:5008:50, 31 October 2016 diff hist +806 N 2016Iudin EMPIAR Created page with "== Citation == Iudin, A.; Korir, P. K.; Salavert-Torres, J.; Kleywegt, G. J. & Patwardhan, A. EMPIAR: a public archive for raw electron microscopy image data. Nature methods,..." current
• 08:4408:44, 31 October 2016 diff hist +63 Main Page →Databases
• 06:4006:40, 31 October 2016 diff hist +1,000 N 2016FernandezLeiro Review Created page with "== Citation == Fernandez-Leiro, R. & Scheres, S. H. W. Unravelling biological macromolecules with cryo-electron microscopy. Nature, 2016, 537, 339-346 == Abstract == Knowle..." current
• 06:3906:39, 31 October 2016 diff hist +60 Main Page →Books and reviews

24 October 2016

• 21:1121:11, 24 October 2016 diff hist +1,642 N 2010Zhang NegativeStaining Created page with "== Citation == Zhang, L.; Song, J.; Newhouse, Y.; Zhang, S.; Weisgraber, K. H. & Ren, G. An optimized negative-staining protocol of electron microscopy for apoE4 POPC lipopro..." current
• 21:1021:10, 24 October 2016 diff hist +92 Main Page →Sample preparation

21 October 2016

• 14:0514:05, 21 October 2016 diff hist −4 2012Zhang PositiveStaining No edit summary current
• 14:0514:05, 21 October 2016 diff hist +1,507 N 2012Zhang PositiveStaining Created page with "== Citation == Zhang, L.; Yan, F.; Zhang, S.; Lei, D.; Charles, M. A.; Cavigiolio, G.; Oda, M.; Krauss, R. M.; Weisgraber, K. H.; Rye, K.-A.; Pownall, H. J.; Qiu, X. & Ren, G..."
• 14:0414:04, 21 October 2016 diff hist +66 Main Page →Sample preparation
• 14:0014:00, 21 October 2016 diff hist +2,823 N 2012Zhang IPET FETR Created page with "== Citation == Zhang, L. & Ren, G. IPET and FETR: experimental approach for studying molecular structure dynamics by cryo-electron tomography of a single-molecule structure...."
• 13:5813:58, 21 October 2016 diff hist +114 Main Page →3D reconstruction
• 13:5613:56, 21 October 2016 diff hist +2,378 N 2014Rames NegativeStaining Created page with "== Citation == Rames, M.; Yu, Y. & Ren, G. Optimized negative staining: a high-throughput protocol for examining small and asymmetric protein structure by electron microscopy..." current
• 13:5513:55, 21 October 2016 diff hist +76 Main Page →Sample preparation
• 13:4713:47, 21 October 2016 diff hist +1,743 N 2016Liu TiltControl Created page with "== Citation == Liu, J.; Li, H.; Zhang, L.; Rames, M.; Zhang, M.; Yu, Y.; Peng, B.; Celis, C. D.; Xu, A.; Zou, Q.; Yang, X.; Chen, X. & Ren, G. Fully Mechanically Controlled A..." current
• 13:4613:46, 21 October 2016 diff hist +100 Main Page →Automated data collection
• 13:3913:39, 21 October 2016 diff hist +2,197 N 2013Desfosses Spring Created page with "== Citation == Desfosses, A.; Ciuffa, R.; Gutsche, I. & Sachse, C. SPRING - an image processing package for single-particle based helical reconstruction from electron cryomic..." current
• 13:3813:38, 21 October 2016 diff hist +73 Main Page →Reconstruction
• 13:3613:36, 21 October 2016 diff hist +2,034 N 2016Rohou Frealix Created page with "== Citation == Rohou, A. & Grigorieff, N. Frealix: model-based refinement of helical filament structures from electron micrographs. Journal of structural biology, 2014, 186,..." current
• 13:3413:34, 21 October 2016 diff hist +71 Main Page →Reconstruction

18 October 2016

• 06:4406:44, 18 October 2016 diff hist +1,329 N 2016Jonic Review Created page with "== Citation == S. Jonic. Cryo-electron Microscopy Analysis of Structurally Heterogeneous Macromolecular Complexes. Computational and Structural Biotechnology Journal (2016)..." current
• 06:4306:43, 18 October 2016 diff hist −2 Main Page →Books and reviews
• 06:4306:43, 18 October 2016 diff hist −13 Main Page →Books and reviews
• 06:4206:42, 18 October 2016 diff hist +108 Main Page →Books and reviews

17 October 2016

• 11:5811:58, 17 October 2016 diff hist +1,556 N 2016Kim SAXS Created page with "== Citation == Kim, J. S.; Afsari, B. & Chirikjian, G. S. Cross-Validation of Data Compatibility Between Small Angle X-ray Scattering and Cryo-Electron Microscopy. Journal of..." current
• 11:5611:56, 17 October 2016 diff hist +77 Main Page →Validation
• 06:5806:58, 17 October 2016 diff hist −1 2016Reboul Stochastic →Abstract current
• 06:5706:57, 17 October 2016 diff hist +1,359 N 2016Reboul Stochastic Created page with "== Citation == Reboul, C. F.; Bonnet, F.; Elmlund, D. & Elmlund, H. A Stochastic Hill Climbing Approach for Simultaneous 2D Alignment and Clustering of Cryogenic Electron Mic..."
• 06:5706:57, 17 October 2016 diff hist +95 Main Page →2D Classification and clustering
• 06:4906:49, 17 October 2016 diff hist +1,088 N 2010Elmlund AbInitio Created page with "== Citation == Elmlund, D.; Davis, R. & Elmlund, H. Ab initio structure determination from electron microscopic images of single molecules coexisting in different functional..." current
• 06:4806:48, 17 October 2016 diff hist +105 Main Page →3D Heterogeneity

11 October 2016

• 05:3805:38, 11 October 2016 diff hist +2,017 N 2016Takizawa Sample Created page with "== Citation == Takizawa, Y.; Binshtein, E.; Erwin, A. L.; Pyburn, T. M.; Mittendorf, K. F. & Ohi, M. D. While the revolution will not be crystallized, biochemistry reigns sup..." current
• 05:3705:37, 11 October 2016 diff hist +77 Main Page →Sample preparation
• 05:1805:18, 11 October 2016 diff hist +1,919 N 2016Bharat Relion Created page with "== Citation == Bharat, T. A. M. & Scheres, S. H. W. Resolving macromolecular structures from electron cryo-tomography data using subtomogram averaging in RELION. Nature proto..." current
• 05:1605:16, 11 October 2016 diff hist +72 Main Page →Subtomogram analysis
• 04:5904:59, 11 October 2016 diff hist +85 Main Page →How to subscribe to this page

10 October 2016

• 14:2114:21, 10 October 2016 diff hist +174 Main Page →How to subscribe to this page

20 September 2016

• 07:4607:46, 20 September 2016 diff hist +26 Main Page →How to subscribe to this page