User contributions for CoSS

20 July 2017

• 06:1606:16, 20 July 2017 diff hist +1,052‎ N 2015Hanson Continuum ‎ Created page with "== Citation == Hanson, B.; Richardson, R.; Oliver, R.; Read, D. J.; Harlen, O. & Harris, S. Modelling biomacromolecular assemblies with continuum mechanics. Biochemical Socie..." current
• 06:1406:14, 20 July 2017 diff hist +88‎ Main Page ‎ →‎Fitting and docking
• 06:0306:03, 20 July 2017 diff hist +1,345‎ N 2017He FIB ‎ Created page with "== Citation == He, J.; Hsieh, C.; Wu, Y.; Schmelzer, T.; Wang, P.; Lin, Y.; Marko, M. & Sui, H. Cryo-FIB specimen preparation for use in a cartridge-type cryo-TEM. Journal of..." current
• 06:0206:02, 20 July 2017 diff hist +6‎ Main Page ‎ →‎Sample preparation
• 06:0106:01, 20 July 2017 diff hist +50‎ Main Page ‎ →‎Sample preparation

4 July 2017

• 06:1406:14, 4 July 2017 diff hist +2,006‎ N 2017Turk ModelBuilding ‎ Created page with "== Citation == Turk, D. Boxes of Model Building and Visualization. Methods in molecular biology, 2017, 1607, 491-548 == Abstract == Macromolecular crystallography and elect..." current
• 06:1306:13, 4 July 2017 diff hist +97‎ Main Page ‎ →‎Fitting and docking
• 06:1006:10, 4 July 2017 diff hist +1,400‎ N 2017Moriya Sphire ‎ Created page with "== Citation == Moriya, T.; Saur, M.; Stabrin, M.; Merino, F.; Voicu, H.; Huang, Z.; Penczek, P. A.; Raunser, S. & Gatsogiannis, C. High-resolution Single Particle Analysis fr..." current
• 06:0906:09, 4 July 2017 diff hist +69‎ Main Page ‎ →‎Software
• 06:0706:07, 4 July 2017 diff hist +1,157‎ N 2017Galaz Review ‎ Created page with "== Citation == Galaz-Montoya, J. G. & Ludtke, S. J. The advent of structural biology in situ by single particle cryo-electron tomography Biophysics Reports, Springer, 2017, 1..." current
• 06:0606:06, 4 July 2017 diff hist +75‎ Main Page ‎ →‎Books and reviews
• 06:0206:02, 4 July 2017 diff hist +1,184‎ N 2017Scherr HydrogelNanomembranes ‎ Created page with "== Citation == Scherr, J.; Parey, K.; Klusch, N.; Murphy, B. J.; Balser, S.; Neuhaus, A.; Zickermann, V.; Kühlbrandt, W.; Terfort, A. & Rhinow, D. Self-Perforated Hydrogel N..." current
• 06:0006:00, 4 July 2017 diff hist +94‎ Main Page ‎ →‎Sample preparation

19 June 2017

• 05:4505:45, 19 June 2017 diff hist +2,078‎ N 2017Joseph Metrics ‎ Created page with "== Citation == Joseph, A. P.; Lagerstedt, I.; Patwardhan, A.; Topf, M. & Winn, M. Improved metrics for comparing structures of macromolecular assemblies determined by 3D elec..." current
• 05:4405:44, 19 June 2017 diff hist +90‎ Main Page ‎ →‎Fitting and docking
• 05:3805:38, 19 June 2017 diff hist +1,485‎ N 2017Frazier Tomominer ‎ Created page with "== Citation == Frazier, Z.; Xu, M. & Alber, F. TomoMiner and TomoMinerCloud: A Software Platform for Large-Scale Subtomogram Structural Analysis. Structure, 2017, 25, 951-961..." current
• 05:3705:37, 19 June 2017 diff hist +109‎ Main Page ‎ →‎Subtomogram analysis
• 05:3405:34, 19 June 2017 diff hist +1,252‎ N 2017Punjani CryoSPARCTheory ‎ Created page with "== Citation == Punjani, A.; Brubaker, M. A. & Fleet, D. J. Building Proteins in a Day: Efficient 3D Molecular Structure Estimation with Electron Cryomicroscopy. IEEE transact..." current
• 05:3305:33, 19 June 2017 diff hist +77‎ Main Page ‎ →‎3D Reconstruction

13 June 2017

• 05:1905:19, 13 June 2017 diff hist +747‎ N 2017Scapin Storage ‎ Created page with "== Citation == Scapin, G.; Prosise, W. W.; Wismer, M. K. & Strickland, C. A novel storage system for cryoEM samples. Journal of structural biology, 2017, 199, 84-86 == Abstr..." current
• 05:1805:18, 13 June 2017 diff hist +63‎ Main Page ‎ →‎Sample preparation

19 May 2017

• 14:2514:25, 19 May 2017 diff hist +1,257‎ N 2017Biyani Focus ‎ Created page with "== Citation == Biyani, N.; Righetto, R. D.; McLeod, R.; Caujolle-Bert, D.; Castano-Diez, D.; Goldie, K. N. & Stahlberg, H. Focus: The interface between data collection and da..." current
• 14:2314:23, 19 May 2017 diff hist +74‎ Main Page ‎ →‎Automated data collection
• 13:0613:06, 19 May 2017 diff hist +2,119‎ N 2017Wan Simulator ‎ Created page with "== Citation == Wan, X.; Katchalski, T.; Churas, C.; Ghosh, S.; Phan, S.; Lawrence, A.; Hao, Y.; Zhou, Z.; Chen, R.; Chen, Y.; Zhang, F. & Ellisman, M. H. Electron tomography..." current
• 13:0513:05, 19 May 2017 diff hist +69‎ Main Page ‎ →‎Software
• 12:5712:57, 19 May 2017 diff hist +1,512‎ N 2017Rawson Limitations ‎ Created page with "== Citation == Rawson, S.; McPhillie, M.; Johnson, R.; Fishwick, C. & Muench, S. The potential use of single-particle electron microscopy as a tool for structure-based inhibi..." current
• 12:5612:56, 19 May 2017 diff hist +78‎ Main Page ‎ →‎Books and reviews

17 May 2017

• 07:5407:54, 17 May 2017 diff hist +1,546‎ N 2017Miyashita EnsembleFitting ‎ Created page with "== Citation == Miyashita, O.; Kobayashi, C.; Mori, T.; Sugita, Y. & Tama, F. Flexible fitting to cryo-EM density map using ensemble molecular dynamics simulations. Journal of..." current
• 07:5307:53, 17 May 2017 diff hist +93‎ Main Page ‎ →‎Fitting and docking
• 06:1606:16, 17 May 2017 diff hist +1,103‎ N 2017Feng SprayingPlunging ‎ Created page with "== Citation == Feng, X.; Fu, Z.; Kaledhonkar, S.; Jia, Y.; Shah, B.; Jin, A.; Liu, Z.; Sun, M.; Chen, B.; Grassucci, R. A.; Ren, Y.; Jiang, H.; Frank, J. & Lin, Q. A Fast and..." current
• 06:1506:15, 17 May 2017 diff hist +64‎ Main Page ‎ →‎Sample preparation
• 06:1206:12, 17 May 2017 diff hist +1,467‎ N 2017Matsumoto Distribution ‎ Created page with "== Citation == Matsumoto, A.; Miyazaki, N.; Takagi, J. & Iwasaki, K. 2D hybrid analysis: Approach for building three-dimensional atomic model by electron microscopy image mat..." current
• 06:1106:11, 17 May 2017 diff hist +110‎ Main Page ‎ →‎Fitting and docking
• 06:0806:08, 17 May 2017 diff hist +1,781‎ N 2017Patwhardan Trends ‎ Created page with "== Citation == Patwardhan, A. Trends in the Electron Microscopy Data Bank (EMDB) Acta Crystallographica Section D: Structural Biology, International Union of Crystallography,..." current
• 06:0706:07, 17 May 2017 diff hist +58‎ Main Page ‎ →‎Databases

11 May 2017

• 21:3721:37, 11 May 2017 diff hist +1,670‎ N 2013Ison EDAM ‎ Created page with "== Citation == Ison, J.; Kalas, M.; Jonassen, I.; Bolser, D.; Uludag, M.; McWilliam, H.; Malone, J.; Lopez, R.; Pettifer, S. & Rice, P. EDAM: an ontology of bioinformatics op..." current
• 21:3721:37, 11 May 2017 diff hist +82‎ Main Page ‎ →‎Databases
• 21:0421:04, 11 May 2017 diff hist +1,137‎ N 2017Zheng MotionCorr2 ‎ Created page with "== Citation == Zheng, S. Q.; Palovcak, E.; Armache, J.-P.; Verba, K. A.; Cheng, Y. & Agard, D. A. MotionCor2: anisotropic correction of beam-induced motion for improved cryo-..." current
• 21:0021:00, 11 May 2017 diff hist +74‎ Main Page ‎ →‎2D Preprocessing
• 20:5320:53, 11 May 2017 diff hist +1,086‎ N 2017Arnold BlottingFree ‎ Created page with "== Citation == Arnold, S. A.; Albiez, S.; Bieri, A.; Syntychaki, A.; Adaixo, R.; McLeod, R. A.; Goldie, K. N.; Stahlberg, H. & Braun, T. Blotting-free and lossless cryo-elect..." current
• 20:5320:53, 11 May 2017 diff hist +70‎ Main Page ‎ →‎Sample preparation
• 20:4920:49, 11 May 2017 diff hist +1,953‎ N 2017Mastronarde Automatic ‎ Created page with "== Citation == Mastronarde, D. N. & Held, S. R. Automated tilt series alignment and tomographic reconstruction in IMOD. Journal of structural biology, 2017, 197, 102-113 ==..." current
• 20:4820:48, 11 May 2017 diff hist +109‎ Main Page ‎ →‎Image alignment
• 20:4420:44, 11 May 2017 diff hist −41‎ 2017Schaffer FocusedIonBeam ‎ →‎Links current
• 20:4320:43, 11 May 2017 diff hist +1,692‎ N 2017Schaffer FocusedIonBeam ‎ Created page with "== Citation == Schaffer, M.; Mahamid, J.; Engel, B. D.; Laugks, T.; Baumeister, W. & Plitzko, J. M. Optimized cryo-focused ion beam sample preparation aimed at in situ struct..."
• 20:4220:42, 11 May 2017 diff hist +106‎ Main Page ‎ →‎Sample preparation
• 20:3720:37, 11 May 2017 diff hist +1,652‎ N 2017Hryc WeightedAtoms ‎ Created page with "== Citation == Hryc, C. F.; Chen, D.-H.; Afonine, P. V.; Jakana, J.; Wang, Z.; Haase-Pettingell, C.; Jiang, W.; Adams, P. D.; King, J. A.; Schmid, M. F. & Chiu, W. Accurate m..." current
• 20:3020:30, 11 May 2017 diff hist +115‎ Main Page ‎ →‎Fitting and docking
• 20:2420:24, 11 May 2017 diff hist +5‎ Main Page ‎ →‎2D Preprocessing
• 20:2320:23, 11 May 2017 diff hist +1,314‎ N 2016Bajic Denoising ‎ Created page with "== Citation == Bajić, B.; Lindblad, J. & Sladoje, N. Blind restoration of images degraded with mixed Poisson-Gaussian noise with application in transmission electron m..."