User contributions for CoSS

11 May 2017

• 20:2220:22, 11 May 2017 diff hist +84 Main Page →2D Preprocessing
• 20:0920:09, 11 May 2017 diff hist +1,820 N 2017Kunz 3DCTF Created page with "== Citation == Kunz, M. & Frangakis, A. S. Three-dimensional CTF correction improves the resolution of electron tomograms. Journal of structural biology, 2017, 197, 114-122..." current
• 20:0820:08, 11 May 2017 diff hist +54 Main Page →CTF estimation and restoration
• 20:0520:05, 11 May 2017 diff hist +2,003 N 2017Castano ParticlePicking Created page with "== Citation == Castaño-Díez, D.; Kudryashev, M. & Stahlberg, H. Dynamo Catalogue: Geometrical tools and data management for particle picking in subtomogram averaging of cry..." current
• 20:0420:04, 11 May 2017 diff hist +104 Main Page →Subtomogram analysis
• 20:0220:02, 11 May 2017 diff hist +1,588 N 2017Hagen DoseTomography Created page with "== Citation == Hagen, W. J. H.; Wan, W. & Briggs, J. A. G. Implementation of a cryo-electron tomography tilt-scheme optimized for high resolution subtomogram averaging. Journ..." current
• 20:0120:01, 11 May 2017 diff hist +90 Main Page →Collection geometry
• 13:4413:44, 11 May 2017 diff hist +1,498 N 2017McLeod Zorro Created page with "== Citation == McLeod, R. A.; Kowal, J.; Ringler, P. & Stahlberg, H. Robust image alignment for cryogenic transmission electron microscopy. Journal of structural biology, 201..." current
• 13:4313:43, 11 May 2017 diff hist +63 Main Page →2D Preprocessing

6 May 2017

• 22:1322:13, 6 May 2017 diff hist +143 Main Page →Online courses

3 April 2017

• 06:2906:29, 3 April 2017 diff hist +1,435 N 2017Shao PDBQuality Created page with "== Citation == Shao, C.; Yang, H.; Westbrook, J. D.; Young, J. Y.; Zardecki, C. & Burley, S. K. Multivariate Analyses of Quality Metrics for Crystal Structures in the PDB Arc..." current
• 06:2806:28, 3 April 2017 diff hist +64 Main Page →Databases

24 March 2017

• 07:0607:06, 24 March 2017 diff hist +1,206 N 2017Mishyna DNARadiation Created page with "== Citation == Mishyna, M.; Volokh, O.; Danilova, Y.; Gerasimova, N.; Pechnikova, E. & Sokolova, O. S. Effects of radiation damage in studies of protein-DNA complexes by cryo..." current
• 07:0507:05, 24 March 2017 diff hist +80 Main Page →Image formation

13 March 2017

• 18:3518:35, 13 March 2017 diff hist +1,302 N 2017Monroe PDBRefinement Created page with "== Citation == Monroe, L.; Terashi, G. & Kihara, D. Variability of Protein Structure Models from Electron Microscopy. Structure, 25:1-11, 2017 == Abstract == An increasing..." current
• 18:3418:34, 13 March 2017 diff hist +88 Main Page →Validation
• 18:2518:25, 13 March 2017 diff hist +1,784 N 2017Sorzano FourierProperties Created page with "== Citation == Sorzano, C. O. S.; Vargas, J.; Otón, J.; Abrishami, V.; de la Rosa-Trevín, J. M.; Gómez-Blanco, J.; Vilas, J. L.; Marabini, R. & Carazo, J. M. A review of r..." current
• 18:2418:24, 13 March 2017 diff hist 0 Main Page →Resolution
• 18:2418:24, 13 March 2017 diff hist 0 Main Page →Books and reviews
• 18:2218:22, 13 March 2017 diff hist +131 Main Page →Books and reviews
• 18:2118:21, 13 March 2017 diff hist +122 Main Page →Resolution

21 February 2017

• 15:3115:31, 21 February 2017 diff hist +974 N 2016Beck Review Created page with "== Citation == Beck, M. & Baumeister, W. Cryo-Electron Tomography: Can it Reveal the Molecular Sociology of Cells in Atomic Detail? Trends in cell biology, 2016, 26, 825-837..." current
• 15:2915:29, 21 February 2017 diff hist +67 Main Page →Books and reviews
• 14:3014:30, 21 February 2017 diff hist +2,095 N 2016Galaz SingleParticleTomography Created page with "== Citation == Galaz-Montoya, J. G.; Hecksel, C. W.; Baldwin, P. R.; Wang, E.; Weaver, S. C.; Schmid, M. F.; Ludtke, S. J. & Chiu, W. Alignment algorithms and per-particle CT..." current
• 14:2814:28, 21 February 2017 diff hist +96 Main Page →Single particle tomography
• 13:4913:49, 21 February 2017 diff hist +1,395 N 2017Punjani CryoSPARC Created page with "== Citation == Punjani, A.; Rubinstein, J. L.; Fleet, D. J. & Brubaker, M. A. cryoSPARC: algorithms for rapid unsupervised cryo-EM structure determination. Nature methods, 20..." current
• 13:4813:48, 21 February 2017 diff hist +53 Main Page →3D Heterogeneity
• 13:4813:48, 21 February 2017 diff hist +53 Main Page →3D Reconstruction

16 February 2017

• 06:4906:49, 16 February 2017 diff hist +96 Main Page →Electron microscopy images

12 January 2017

• 13:3913:39, 12 January 2017 diff hist +897 N 2017Frank Review Created page with "== Citation == Frank, J. Advances in the field of single-particle cryo-electron microscopy over the last decade. Nature protocols, 2017, 12, 209-212 == Abstract == In singl..." current
• 13:3813:38, 12 January 2017 diff hist +1 Main Page →Books and reviews
• 13:3713:37, 12 January 2017 diff hist +61 Main Page →Books and reviews

4 January 2017

• 09:4409:44, 4 January 2017 diff hist +993 N 2014Tomonaga Automatic Created page with "== Citation == Tomonaga, S.; Baba, M. & Baba, N. Alternative automatic alignment method for specimen tilt-series images based on back-projected volume data cross-correlations..." current
• 09:4309:43, 4 January 2017 diff hist +111 Main Page →Image alignment
• 09:3809:38, 4 January 2017 diff hist +1,337 N 2014Han Automatic Created page with "== Citation == Han, R.; Zhang, F.; Wan, X.; Fernández, J.-J.; Sun, F. & Liu, Z. A marker-free automatic alignment method based on scale-invariant features. Journal of struct..." current
• 09:3409:34, 4 January 2017 diff hist +110 Main Page →Image alignment
• 09:3209:32, 4 January 2017 diff hist +2,194 N 2015Han Automatic Created page with "== Citation == Han, R.; Wang, L.; Liu, Z.; Sun, F. & Zhang, F. A novel fully automatic scheme for fiducial marker-based alignment in electron tomography. Journal of structura..." current
• 08:5608:56, 4 January 2017 diff hist +74 Main Page →Image alignment

3 January 2017

• 12:5012:50, 3 January 2017 diff hist +1,938 N 2016Joseph Evolution Created page with "== Citation == Joseph, A. P.; Swapna, L. S.; Rakesh, R. & Srinivasan, N. Use of evolutionary information in the fitting of atomic level protein models in low resolution cryo-..." current
• 12:2612:26, 3 January 2017 diff hist +118 Main Page →Fitting and docking
• 07:0107:01, 3 January 2017 diff hist +1,720 N 2016Jonic PseudoAtoms Created page with "== Citation == S. Jonic and C.O.S. Sorzano. Versatility of Approximating Single-Particle Electron Microscopy Density Maps Using Pseudoatoms and Approximation-Accuracy Control..." current
• 06:5806:58, 3 January 2017 diff hist +102 Main Page →Books and reviews
• 06:4806:48, 3 January 2017 diff hist +1,694 N 2016Vilas AutomaticTilt Created page with "== Citation == Vilas, J. L.; Navas, J.; Gómez-Blanco, J.; de la Rosa-Trevín, J. M.; Melero, R.; Peschiera, I.; Ferlenghi, I.; Cuenca, J.; Marabini, R.; Carazo, J. M.; Varga..." current
• 06:4806:48, 3 January 2017 diff hist +121 Main Page →Automatic particle picking
• 06:4306:43, 3 January 2017 diff hist +1,633 N 2016Vargas FoilHole Created page with "== Citation == Vargas, J.; Franken, E.; Sorzano, C. O. S.; Gomez-Blanco, J.; Schoenmakers, R.; Koster, A. J. & Carazo, J. M. Foil-hole and data image quality assessment in 3D..." current
• 06:4206:42, 3 January 2017 diff hist +93 Main Page →Automated data collection
• 06:2706:27, 3 January 2017 diff hist +1,492 N 2016Patwhardan EMDB Created page with "== Citation == Patwardhan, A. & Lawson, C. L. Databases and Archiving for CryoEM. Methods in enzymology, 2016, 579, 393-41 == Abstract == CryoEM in structural biology is cu..." current
• 06:2606:26, 3 January 2017 diff hist +56 Main Page →Databases
• 06:2206:22, 3 January 2017 diff hist +1,484 N 2016Wang Rosetta Created page with "== Citation == Wang, R. Y.-R.; Song, Y.; Barad, B. A.; Cheng, Y.; Fraser, J. S. & DiMaio, F. Automated structure refinement of macromolecular assemblies from cryo-EM maps usi..." current
• 06:2106:21, 3 January 2017 diff hist +103 Main Page →Fitting and docking