User contributions for WikiSysop

16 May 2019

• 05:2905:29, 16 May 2019 diff hist +87 Main Page →Sample preparation
• 05:2205:22, 16 May 2019 diff hist +1,620 N 2010Xu Long Created page with "== Citation == Xu, W.; Xu, F.; Jones, M.; Keszthelyi, B.; Sedat, J.; Agard, D. & Mueller, K. High-performance iterative electron tomography reconstruction with long-object co..." current
• 05:2005:20, 16 May 2019 diff hist +110 Main Page →3D reconstruction

13 May 2019

• 16:1016:10, 13 May 2019 diff hist +2,081 N 2016Turonova Artifacts Created page with "== Citation == Turoňová, B.; Marsalek, L. & Slusallek, P. On geometric artifacts in cryo electron tomography. Ultramicroscopy, 2016 , 163 , 48-61 == Abstract == Single-..." current
• 16:0916:09, 13 May 2019 diff hist +88 Main Page →3D reconstruction
• 12:1512:15, 13 May 2019 diff hist +1,323 N 2019Yan MBIR Created page with "== Citation == Yan, R.; Venkatakrishnan, S. V.; Liu, J.; Bouman, C. A.; Jiang, W. MBIR: A cryo-ET 3D reconstruction method that effectively minimizes missing wedge artifacts..." current
• 12:1412:14, 13 May 2019 diff hist +115 Main Page →3D reconstruction
• 12:1312:13, 13 May 2019 diff hist −1 2015Venkatakrishnan MBIR No edit summary current
• 12:1212:12, 13 May 2019 diff hist +1,836 N 2015Venkatakrishnan MBIR Created page with "== Citation == Venkatakrishnan, S. V.; Drummy, L. F.; Jackson, M.; De Graef, M.; Simmons, J.; Bouman, C. A. Model-Based Iterative Reconstruction for Bright-Field Electron T..."
• 12:0812:08, 13 May 2019 diff hist +76 Main Page →3D reconstruction

6 May 2019

• 15:3415:34, 6 May 2019 diff hist +1,698 N 2019Zhang Local Created page with "== Citation == Zhang, C.; Cantara, W.; Jeon, Y.; Musier-Forsyth, K.; Grigorieff, N. & Lyumkis, D. Analysis of discrete local variability and structural covariance in macromol..." current
• 15:3315:33, 6 May 2019 diff hist +70 Main Page →3D Heterogeneity

3 May 2019

• 12:1212:12, 3 May 2019 diff hist +1,749 N 2019Peet EnergyDependence Created page with "== Citation == Peet, M. J.; Henderson, R. & Russo, C. J. The energy dependence of contrast and damage in electron cryomicroscopy of biological molecules. Ultramicroscopy, 201..." current
• 12:1112:11, 3 May 2019 diff hist +85 Main Page →Image formation

17 April 2019

• 17:4017:40, 17 April 2019 diff hist +2,080 N 2018Cheng BeamShift Created page with "== Citation == Cheng, A.; Eng, E. T.; Alink, L.; Rice, W. J.; Jordan, K. D.; Kim, L. Y.; Potter, C. S. & Carragher, B. High resolution single particle cryo-electron microscop..." current
• 17:3917:39, 17 April 2019 diff hist +83 Main Page →Collection geometry
• 17:3017:30, 17 April 2019 diff hist +1,335 N 2019Herzik Multimodel Created page with "== Citation == Herzik, M. A.; Fraser, J. S. & Lander, G. C. A Multi-model Approach to Assessing Local and Global Cryo-EM Map Quality. Structure, 2019, 27, 344-358.e3 == Abs..." current
• 17:2817:28, 17 April 2019 diff hist +91 Main Page →Validation
• 17:2417:24, 17 April 2019 diff hist +10 2018Su GoCTF No edit summary current
• 17:1217:12, 17 April 2019 diff hist +1,413 N 2018Anoshina Simulation Created page with "== Citation == Anoshina, N.; Sagindykov, T. & Sorokin, D. A Method for Generation of Synthetic 2D and 3D Cryo-EM Images. Programming and Computer Software, Springer, 2018, 44..." current
• 17:1117:11, 17 April 2019 diff hist +79 Main Page →Image formation

16 April 2019

• 06:0006:00, 16 April 2019 diff hist +2,101 N 2018Zhao Fast Created page with "== Citation == Zhao, Y.; Zeng, X.; Guo, Q. & Xu, M. An integration of fast alignment and maximum-likelihood methods for electron subtomogram averaging and classification. Bio..." current
• 05:5705:57, 16 April 2019 diff hist +97 Main Page →Subtomogram analysis
• 05:5405:54, 16 April 2019 diff hist +1,548 N 2018Carugo BFactors Created page with "== Citation == Carugo, O. How large B-factors can be in protein crystal structures. BMC bioinformatics, 2018, 19, 61 == Abstract == Protein crystal structures are potentia..." current
• 05:5305:53, 16 April 2019 diff hist +88 Main Page →Resolution
• 05:4905:49, 16 April 2019 diff hist +1,500 N 2018Boumal SinglePass Created page with "== Citation == Boumal, N.; Bendory, T.; Lederman, R. R. & Singer, A. Heterogeneous multireference alignment: A single pass approach. Proc. 52nd Annual Conf. Information Scien..." current
• 05:4805:48, 16 April 2019 diff hist +5 Main Page →3D Reconstruction
• 05:4705:47, 16 April 2019 diff hist +77 Main Page →2D Classification and clustering
• 05:4505:45, 16 April 2019 diff hist +2,081 N 2018Levin Kam Created page with "== Citation == Levin, E.; Bendory, T.; Boumal, N.; Kileel, J. & Singer, A. 3D ab initio modeling in cryo-EM by autocorrelation analysis. Proc. IEEE 15th Int. Symp. Biomedical..." current
• 05:4305:43, 16 April 2019 diff hist +88 Main Page →3D Reconstruction
• 05:3205:32, 16 April 2019 diff hist +1,495 N 2019Bonomi Multiscale Created page with "== Citation == Bonomi, M.; Hanot, S.; Greenberg, C. H.; Sali, A.; Nilges, M.; Vendruscolo, M. & Pellarin, R. Bayesian Weighing of Electron Cryo-Microscopy Data for Integrativ..." current
• 05:3105:31, 16 April 2019 diff hist +74 Main Page →Fitting and docking
• 05:1705:17, 16 April 2019 diff hist +2,458 N 2019Wang Biobjective Created page with "== Citation == Wang, W. L.; Yu, Z.; Castillo-Menendez, L. R.; Sodroski, J. & Mao, Y. Robustness of signal detection in cryo-electron microscopy via a bi-objective-function ap..." current
• 05:1605:16, 16 April 2019 diff hist +92 Main Page →Automatic particle picking

29 March 2019

• 17:2217:22, 29 March 2019 diff hist +2,378 N 2019Avramov DeepLearning Created page with "== Citation == Avramov, T. K.; Vyenielo, D.; Gomez-Blanco, J.; Adinarayanan, S.; Vargas, J. & Si, D. Deep Learning for Validating and Estimating Resolution of Cryo-Electron M..." current
• 17:2117:21, 29 March 2019 diff hist +123 Main Page →Resolution
• 17:1417:14, 29 March 2019 diff hist +1,594 N 2019Fernandez residual Created page with "== Citation == Fernandez, J.-J.; Li, S. & Agard, D. A. Consideration of sample motion in cryo-tomography based on alignment residual interpolation. Journal of structural biol..." current
• 17:1117:11, 29 March 2019 diff hist +98 Main Page →Image alignment

27 March 2019

• 14:4814:48, 27 March 2019 diff hist +1,335 N 2018Vilas MonoRes Created page with "== Citation == Jose Luis Vilas, Josué Gómez-Blanco, Pablo Conesa, Roberto Melero, José Miguel de la Rosa-Trevín, Joaquin Otón, Jesús Cuenca, Roberto Marabini, José Mar..." current
• 14:4614:46, 27 March 2019 diff hist +77 Main Page →Resolution

26 March 2019

• 22:2422:24, 26 March 2019 diff hist +1,752 N 2019Havelkova Regularization Created page with "== Citation == Havelkova, E. Regularization methods for discrete inverse problems arising in single particle analysis. Fac. Mathematics and Physics, Charles University, Fac...." current
• 22:2322:23, 26 March 2019 diff hist +95 Main Page →3D Reconstruction
• 22:1622:16, 26 March 2019 diff hist +1,148 N 2009Rose Optics Created page with "== Citation == Rose, H. Geometrical Charged-Particle Optics. Springer, 2009 == Abstract == This reference monograph covers all theoretical aspects of modern geometrical cha..." current
• 22:1522:15, 26 March 2019 diff hist +72 Main Page →Image formation

25 March 2019

• 07:1407:14, 25 March 2019 diff hist +1,773 N 2019Zivanov BayesianBIM Created page with "== Citation == Zivanov, J.; Nakane, T. & Scheres, S. H. W. A Bayesian approach to beam-induced motion correction in cryo-EM single-particle analysis. IUCrJ, 2019 , 6 , 5-17..." current
• 07:1307:13, 25 March 2019 diff hist +90 Main Page →2D Preprocessing
• 07:0907:09, 25 March 2019 diff hist +965 N 2018Michels RBF Created page with "== Citation == Michels, Y.; Baudrier, E.; Mazo, L. Radial Function Based Ab-Initio Tomographic Reconstruction for Cryo Electron Microscopy, 25th IEEE Intl. Conf. on Image Pro..." current
• 07:0807:08, 25 March 2019 diff hist +95 Main Page →3D Reconstruction
• 07:0407:04, 25 March 2019 diff hist −92 Main Page →Fitting and docking
• 07:0107:01, 25 March 2019 diff hist +92 Main Page →Fitting and docking