User contributions for WikiSysop

5 January 2021

• 08:4008:40, 5 January 2021 diff hist −1 2020Penczek mFSC No edit summary current
• 08:3908:39, 5 January 2021 diff hist +1,720 N 2020Penczek mFSC Created page with "== Citation == Penczek, P. A. Reliable cryo-EM resolution estimation with modified Fourier shell correlation. IUCrJ, 2020, 7 == Abstract == A modified Fourier shell correl..."
• 08:3408:34, 5 January 2021 diff hist +83 Main Page →Resolution
• 07:3807:38, 5 January 2021 diff hist +1,548 N 2020Punjani NonUniform Created page with "== Citation == Punjani, A.; Zhang, H.; Fleet, D. J. Non-uniform refinement: adaptive regularization improves single-particle cryo-EM reconstruction. Nature Methods, 2020, 17,..." current
• 07:3707:37, 5 January 2021 diff hist +67 Main Page →3D Reconstruction

25 December 2020

• 11:3211:32, 25 December 2020 diff hist +94 Main Page →Online courses and Learning material

26 October 2020

• 08:3708:37, 26 October 2020 diff hist +1,778 N 2020Tichelaar Thick Created page with "== Citation == Tichelaar, W.; Hagen, W. J. H.; Gorelik, T. E.; Xue, L.; Mahamid, J. TEM bright field imaging of thick specimens: nodes in Thon ring patterns. Ultramicroscopy,..." current
• 08:3508:35, 26 October 2020 diff hist +206 Main Page →Image formation

5 October 2020

• 14:0514:05, 5 October 2020 diff hist +2,107 N 2020Gruza Atomic Created page with "== Citation == Gruza, B.; Chodkiewicz, M. L.; Krzeszczakowska, J.; Dominiak, P. M. Refinement of organic crystal structures with multipolar electron scattering factors. Acta..." current
• 14:0114:01, 5 October 2020 diff hist +109 Main Page →Image formation

29 September 2020

• 08:4608:46, 29 September 2020 diff hist −2 2020Zhang LimitsSimulated →Citation current
• 08:4508:45, 29 September 2020 diff hist +2,019 N 2020Zhang LimitsSimulated Created page with "== Citation == Zhang, Y.; Tammaro, R.; Peters, P. J.; Ravelli, R. B. G. Could Egg White Lysozyme be Solved by Single Particle Cryo-EM? Journal of chemical information and mo..."
• 08:4308:43, 29 September 2020 diff hist +127 Main Page →Image formation
• 07:1007:10, 29 September 2020 diff hist +1,477 N 2020Sorzano automatic Created page with "== Citation == Sorzano, C. O. S.; de Isidro-Gómez, F.; Fernández-Giménez, E.; Herreros, D.; Marco, S.; Carazo, J. M.; Messaoudi, C. Improvements on marker-free images alig..." current
• 07:0907:09, 29 September 2020 diff hist +107 Main Page →Image alignment

20 August 2020

• 08:0608:06, 20 August 2020 diff hist +1,727 N 2020Klebl Deposition Created page with "== Citation == Klebl, D. P.; Monteiro, D. C. F.; Kontziampasis, D.; Kopf, F.; Sobott, F.; White, H. D.; Trebbin, M.; Muench, S. P. Sample deposition onto cryo-EM grids: from..." current
• 08:0508:05, 20 August 2020 diff hist +94 Main Page →Sample preparation

19 August 2020

• 09:1109:11, 19 August 2020 diff hist +1,456 N 2020Lederman representation Created page with "== Citation == Lederman, R. R.; Singer, A. A representation theory perspective on simultaneous alignment and classification. Applied and Computational Harmonic Analysis, 2020..." current
• 09:0709:07, 19 August 2020 diff hist +117 Main Page →2D Alignment

14 August 2020

• 11:0611:06, 14 August 2020 diff hist +1,423 N 2020Sanchez Hybrid Created page with "== Citation == Sanchez, R. M.; Zhang, Y.; Chen, W.; Dietrich, L.; Kudryashev, M. Subnanometer-resolution structure determination in situ by hybrid subtomogram averaging - sin..." current
• 11:0511:05, 14 August 2020 diff hist +160 Main Page →3D reconstruction

13 August 2020

• 07:2507:25, 13 August 2020 diff hist +2,169 N 2020Guo EER Created page with "== Citation == Guo, H.; Franken, E.; Deng, Y.; Benlekbir, S.; Singla Lezcano, G.; Janssen, B.; Yu, L.; Ripstein, Z.; Tan, Y.; Rubinstein, J. Electron-event representation dat..." current
• 07:2207:22, 13 August 2020 diff hist +79 Main Page →Automated data collection
• 06:5306:53, 13 August 2020 diff hist +1,265 N 2020Weis Acquisition Created page with "== Citation == Weis, F.; Hagen, W. J. H. Combining high throughput and high quality for cryo-electron microscopy data collection. Acta crystallographica. Section D, Structura..." current
• 06:5206:52, 13 August 2020 diff hist +103 Main Page →Automated data collection

12 August 2020

• 07:5007:50, 12 August 2020 diff hist +1,213 N 2020Wu Review Created page with "== Citation == Wu, M.; Lander, G. C. How low can we go? Structure determination of small biological complexes using single-particle cryo-EM. Current Opinion in Structural Bio..." current
• 07:4707:47, 12 August 2020 diff hist +104 Main Page →Books and reviews
• 07:1407:14, 12 August 2020 diff hist +1,907 N 2018Wu contrast Created page with "== Citation == Wu, H.; Zhai, X.; Lei, D.; Liu, J.; Yu, Y.; Bie, R.; Ren, G. An Algorithm for Enhancing the Image Contrast of Electron Tomography. Scientific reports, 2018, 8,..." current
• 07:1007:10, 12 August 2020 diff hist +82 Main Page →Image preprocessing

11 August 2020

• 08:3508:35, 11 August 2020 diff hist +1,883 N 2020Ortiz CrossValidation Created page with "== Citation == Ortiz, S.; Stanisic, L.; Rodriguez, B. A.; Rampp, M.; Hummer, G.; Cossio, P. Validation tests for cryo-EM maps using an independent particle set. Journal of st..." current
• 08:3408:34, 11 August 2020 diff hist +72 Main Page →Validation

7 August 2020

• 07:1607:16, 7 August 2020 diff hist +2,301 N 2020Dubach Review Created page with "== Citation == Dubach, V. R.; Guskov, A. The Resolution in X-ray Crystallography and Single-Particle Cryogenic Electron Microscopy. Crystals, 2020, 10, 580 == Abstract ==..." current
• 07:1507:15, 7 August 2020 diff hist +96 Main Page →Books and reviews
• 07:1007:10, 7 August 2020 diff hist +1,675 N 2020Maeots TimeResolved Created page with "== Citation == Mäeots, M.-E.; Lee, B.; Nans, A.; Jeong, S.-G.; Esfahani, M. M. N.; Ding, S.; Smith, D. J.; Lee, C.-S.; Lee, S. S.; Peter, M.; Enchev, R. I. Modular microflui..." current
• 07:0807:08, 7 August 2020 diff hist +82 Main Page →Sample preparation

5 August 2020

• 08:5008:50, 5 August 2020 diff hist +102 Main Page →Missing-wedge correction
• 08:4908:49, 5 August 2020 diff hist −102 Main Page →Noise reduction
• 08:3608:36, 5 August 2020 diff hist +1,445 N 2020Kovacs Filaments Created page with "== Citation == Kovacs, J.; Song, J.; Auer, M.; He, J.; Hunter, W.; Wriggers, W. Correction of Missing-Wedge Artifacts in Filamentous Tomograms by Template-Based Constrained D..." current
• 08:3408:34, 5 August 2020 diff hist +102 Main Page →Noise reduction

4 August 2020

• 07:1507:15, 4 August 2020 diff hist +2,474 N 2020Vant Flexible Created page with "== Citation == Vant, J. W.; Lahey, S.-L. J.; Jana, K.; Shekhar, M.; Sarkar, D.; Munk, B. H.; Kleinekathöfer, U.; Mittal, S.; Rowley, C.; Singharoy, A. Flexible Fitting of Sm..." current
• 07:1407:14, 4 August 2020 diff hist +110 Main Page →Fitting and docking
• 06:5706:57, 4 August 2020 diff hist +1,870 N 2020Tiwari PixelSize Created page with "== Citation == Tiwari, S. P.; Chhabra, S.; Tama, F.; Miyashita, O. Computational Protocol for Assessing the Optimal Pixel Size to Improve the Accuracy of Single-particle Cryo..." current
• 06:5506:55, 4 August 2020 diff hist +79 Main Page →Validation

3 August 2020

• 11:3311:33, 3 August 2020 diff hist +2,536 N 2020Schenk CryoFlare Created page with "== Citation == Schenk, A. D.; Cavadini, S.; Thomä, N. H.; Genoud, C. Live Analysis and Reconstruction of Single-Particle Cryo-Electron Microscopy Data with CryoFLARE. Journa..." current
• 11:3111:31, 3 August 2020 diff hist +80 Main Page →Automated data collection
• 11:2611:26, 3 August 2020 diff hist −83 Main Page →Validation
• 11:2411:24, 3 August 2020 diff hist +83 Main Page →Validation
• 11:1211:12, 3 August 2020 diff hist −1 2020Leelananda Constraints No edit summary
• 11:1211:12, 3 August 2020 diff hist +2,403 N 2020Leelananda Constraints Created page with "== Citation == Article (Leelananda2020) Leelananda, S. P. & Lindert, S. Using NMR Chemical Shifts and Cryo-EM Density Restraints in Iterative Rosetta-MD Protein Structure R..."
• 11:1111:11, 3 August 2020 diff hist +144 Main Page →Fitting and docking