User contributions for WikiSysop

5 February 2021

• 07:4607:46, 5 February 2021 diff hist +95 Main Page →3D Reconstruction

3 February 2021

• 08:4408:44, 3 February 2021 diff hist +1,542 N 2020Heimowitz Aspire Created page with "== Citation == Heimowitz, A.; Andén, J.; Singer, A. Reducing bias and variance for CTF estimation in single particle cryo-EM. Ultramicroscopy, 2020, 212, 112950 == Abstrac..." current
• 08:4308:43, 3 February 2021 diff hist +70 Main Page →CTF estimation and restoration
• 08:3208:32, 3 February 2021 diff hist +1,282 N 2020Pan TV Created page with "== Citation == Pan, H.; Wen, Y.-W.; Zeng, T. Constrained Total Variation Based Three-Dimension Single Particle Reconstruction in Cryogenic Electron Microscopy. Journal of Sci..." current
• 08:3108:31, 3 February 2021 diff hist +86 Main Page →3D Reconstruction
• 08:2508:25, 3 February 2021 diff hist −2 2020Lai Statistics No edit summary current
• 08:2408:24, 3 February 2021 diff hist +1,215 N 2020Lai Statistics Created page with "== Citation == Lai, T. L.; Wang, S.-H.; Yao, Y.-C.; Chung, S.-C.; Chang, W.-H.; Tu, I.-P. Cryo-EM: breakthroughs in chemistry, structural biology, and statistical underpinnin..."
• 08:2208:22, 3 February 2021 diff hist +97 Main Page →Books and reviews

2 February 2021

• 08:0308:03, 2 February 2021 diff hist +1,402 N 2021Luo Opus Created page with "== Citation == Luo, Z.; Campos-Acevedo, A. A.; Lv, L.; Wang, Q.; Ma, J. Sparseness and Smoothness Regularized Imaging for improving the resolution of Cryo-EM single-particle..." current
• 08:0008:00, 2 February 2021 diff hist +92 Main Page →3D Reconstruction

28 January 2021

• 09:3709:37, 28 January 2021 diff hist +2,160 N 2020Seffernick Hybrid Created page with "== Citation == Seffernick, J. T.; Lindert, S. Hybrid methods for combined experimental and computational determination of protein structure. The Journal of chemical physics,..." current
• 09:3309:33, 28 January 2021 diff hist +126 Main Page →Books and reviews
• 07:4307:43, 28 January 2021 diff hist +1,904 N 2020Yip Atomic Created page with "== Citation == Yip, K. M.; Fischer, N.; Paknia, E.; Chari, A.; Stark, H. Atomic-resolution protein structure determination by cryo-EM. Nature, 2020, 587, 157-161 == Abstrac..." current
• 07:4007:40, 28 January 2021 diff hist +126 Main Page →Image formation

27 January 2021

• 08:2208:22, 27 January 2021 diff hist +2,772 N 2020Alazzawi Auto Created page with "== Citation == Al-Azzawi, A.; Ouadou, A.; Duan, Y.; Cheng, J. Auto3DCryoMap: an automated particle alignment approach for 3D cryo-EM density map reconstruction. BMC bioinform..." current
• 08:1908:19, 27 January 2021 diff hist +110 Main Page →3D Reconstruction

25 January 2021

• 07:1107:11, 25 January 2021 diff hist +846 N 2020Cragnolini Tempy2 Created page with "== Citation == Cragnolini, T.; Sahota, H.; Joseph, A. P.; Sweeney, A.; Malhotra, S.; Vasishtan, D.; Topf, M. TEMPy2: a Python library with improved 3D electron microscopy den..." current
• 06:5906:59, 25 January 2021 diff hist +93 Main Page →Fitting and docking

15 January 2021

• 16:3116:31, 15 January 2021 diff hist +1,643 N 2021Kimanius PriorKnowledge Created page with "== Citation == Kimanius, D.; Zickert, G.; Nakane, T.; Adler, J.; Lunz, S.; Schonlieb, C.-B.; Oktem, O.; Scheres, S. Exploiting prior knowledge about biological macromolecules..." current
• 16:3016:30, 15 January 2021 diff hist +107 Main Page →3D Reconstruction
• 16:1716:17, 15 January 2021 diff hist +1,831 N 2020Liebschner Ceres Created page with "== Citation == Liebschner, D.; Afonine, P. V.; Moriarty, N. W.; Poon, B. K.; Chen, V. B.; Adams, P. D. CERES: a cryo-EM re-refinement system for continuous improvement of dep..." current
• 16:1516:15, 15 January 2021 diff hist +118 Main Page →Fitting and docking

13 January 2021

• 15:0615:06, 13 January 2021 diff hist +374 N 2020Basanta workflow Created page with "== Citation == Basanta, B.; Chowdhury, S.; Lander, G. C.; Grotjahn, D. A. A guided approach for subtomogram averaging of challenging macromolecular assemblies. Journal of str..." current
• 14:5314:53, 13 January 2021 diff hist +77 Main Page →Resolution
• 14:5314:53, 13 January 2021 diff hist −1 Main Page →Subtomogram analysis
• 14:3214:32, 13 January 2021 diff hist +1,578 N 2020Vilas Monotomo Created page with "== Citation == Vilas, J.; Oton, J.; Messaoudi, C.; Melero, R.; Conesa, P.; Ramirez-Aportela, E.; Mota, J.; Martinez, M.; Jimenez, A.; Marabini, R.; J.M. Carazo; J. Vargas; C...." current
• 14:2714:27, 13 January 2021 diff hist +77 Main Page →Subtomogram analysis
• 14:2314:23, 13 January 2021 diff hist +1,268 N 2019Subramaniya DeepSSE Created page with "== Citation == Subramaniya, R.; Terashi, G.; Kihara, D. Protein secondary structure detection in intermediate-resolution cryo-EM maps using deep learning. Nature methods, 201..." current
• 14:2114:21, 13 January 2021 diff hist +106 Main Page →Fitting and docking
• 14:0114:01, 13 January 2021 diff hist −46 2020Huang SuperResolution →Abstract current
• 13:5813:58, 13 January 2021 diff hist +1,764 N 2020Huang SuperResolution Created page with "== Citation == Huang, Q.; Zhou, Y.; Du, X.; Chen, R.; Wang, J.; Rudin, C.; Bartesaghi, A. Cryo-ZSSR: multiple-image super-resolution basedon deep internal learning. Proc. 34t..."
• 13:5713:57, 13 January 2021 diff hist +104 Main Page →2D Preprocessing
• 11:5511:55, 13 January 2021 diff hist +1,339 N 2021Saltzberg IMP Created page with "== Citation == Saltzberg, D. J.; Viswanath, S.; Echeverria, I.; Chemmama, I. E.; Webb, B.; Sali, A. Using Integrative Modeling Platform to compute, validate, and archive a mo..." current
• 11:5411:54, 13 January 2021 diff hist +101 Main Page →Fitting and docking

11 January 2021

• 13:0013:00, 11 January 2021 diff hist +1,584 2020Palovcak noise2noise No edit summary current
• 12:5912:59, 11 January 2021 diff hist +124 N 2020Palovcak noise2noise Created page with "== Citation == == Abstract == == Keywords == == Links == == Related software == == Related methods == == Comments =="
• 12:5812:58, 11 January 2021 diff hist +83 Main Page →2D Preprocessing
• 12:3312:33, 11 January 2021 diff hist +2,339 N 2020Xie Network Created page with "== Citation == Xie, R.; Chen, Y.-X.; Cai, J.-M.; Yang, Y.; Shen, H.-B. SPREAD: A Fully Automated Toolkit for Single-Particle Cryogenic Electron Microscopy Data 3D Reconstruct..." current
• 12:3212:32, 11 January 2021 diff hist +93 Main Page →3D Alignment

8 January 2021

• 10:4010:40, 8 January 2021 diff hist +1,788 N 2019Rubinstein ultrasonic Created page with "== Citation == Rubinstein, J. L.; Guo, H.; Ripstein, Z. A.; Haydaroglu, A.; Au, A.; Yip, C. M.; Di Trani, J. M.; Benlekbir, S.; Kwok, T. Shake-it-off: a simple ultrasonic cry..." current
• 10:3910:39, 8 January 2021 diff hist +85 Main Page →Sample preparation
• 10:3010:30, 8 January 2021 diff hist +1,186 N 2020Naydenova Buckling Created page with "== Citation == Naydenova, K.; Jia, P.; Russo, C. J. Cryo-EM with sub-1 Å specimen movement. Science, 2020, 370, 223-226 == Abstract == Most information loss in cryogenic..." current
• 10:2910:29, 8 January 2021 diff hist +92 Main Page →Image formation
• 10:0810:08, 8 January 2021 diff hist +1,712 N 2020Terwilliger density Created page with "== Citation == Terwilliger, T. C.; Sobolev, O. V.; Afonine, P. V.; Adams, P. D.; Read, R. J. Density modification of cryo-EM maps. Acta crystallographica. Section D, Structur..." current
• 10:0610:06, 8 January 2021 diff hist +81 Main Page →Sharpening of high resolution information
• 09:4609:46, 8 January 2021 diff hist +1,943 N 2020Caesar Simple3 Created page with "== Citation == Caesar, J.; Reboul, C. F.; Machello, C.; Kiesewetter, S.; Tang, M. L.; Deme, J. C.; Johnson, S.; Elmlund, D.; Lea, S. M.; Elmlund, H. SIMPLE 3.0. Stream single..." current
• 09:4509:45, 8 January 2021 diff hist +49 Main Page →Software
• 09:2309:23, 8 January 2021 diff hist +1,407 N 2020Moebel MCMC Created page with "== Citation == Moebel, E., Kervrann, C. A Monte Carlo framework for missing wedge restoration and noise removal in cryo-electron tomography. Journal of Structural Biology: X,..." current
• 09:2209:22, 8 January 2021 diff hist +92 Main Page →Missing-wedge correction

5 January 2021

• 10:3710:37, 5 January 2021 diff hist +1,490 N 2020Chung Prepro Created page with "== Citation == Chung, S.-C.; Lin, H.-H.; Niu, P.-Y.; Huang, S.-H.; Tu, I.-P. & Chang, W.-H. Pre-pro is a fast pre-processor for single-particle cryo-EM by enhancing 2D cl..." current