User contributions for WikiSysop

23 March 2022

• 08:1808:18, 23 March 2022 diff hist +92 Main Page →Fitting and docking
• 08:1008:10, 23 March 2022 diff hist +1,637 N 2021Li detergents Created page with "== Citation == Li, Bufan / Zhu, Dongjie / Shi, Huigang / Zhang, Xinzheng. Effect of charge on protein preferred orientation at the air-water interface in cryo-electron micros..." current
• 08:0608:06, 23 March 2022 diff hist +92 Main Page →Sample preparation

11 February 2022

• 12:3612:36, 11 February 2022 diff hist +2,379 N 2021Dimchev filaments Created page with "== Citation == Dimchev, Georgi / Amiri, Behnam / Fäßler, Florian / Falcke, Martin / Schur, Florian Km. Computational toolbox for ultrastructural quantitative analysis of fi..." current
• 12:3412:34, 11 February 2022 diff hist +82 Main Page →Segmentation
• 07:3907:39, 11 February 2022 diff hist +1,715 N 2021Frangakis Review Created page with "== Citation == Frangakis, Achilleas S. It's noisy out there! A review of denoising techniques in cryo-electron tomography. 2021. J. structural biology, 213: 107804 == Abstr..." current
• 07:3807:38, 11 February 2022 diff hist +94 Main Page →Books and reviews

30 December 2021

• 18:4218:42, 30 December 2021 diff hist +1,265 N 2022Chojnowski findMySeq Created page with "== Citation == Chojnowski, G.; Simpkin, A. J.; Leonardo, D. A.; Seifert-Davila, W.; Vivas-Ruiz, D. E.; Keegan, R. & Rigden, D. findMySequence: a neural-network-based appr..." current
• 18:4218:42, 30 December 2021 diff hist +98 Main Page →Fitting and docking
• 18:2518:25, 30 December 2021 diff hist +2,212 N 2021Li PickerOptimizers Created page with "== Citation == Li, H.; Chen, G.; Gao, S.; Li, J. & Zhang, F. PickerOptimizer: A Deep Learning-Based Particle Optimizer for Cryo-Electron Microscopy Particle-Picking Algorithm..." current
• 18:2418:24, 30 December 2021 diff hist +103 Main Page →Automatic particle picking
• 17:1817:18, 30 December 2021 diff hist −1 Main Page →Subtomogram analysis

13 December 2021

• 09:3209:32, 13 December 2021 diff hist +1,385 N 2021Strelak Xmipp Created page with "== Citation == Strelak, D.; Jiménez-Moreno, A.; Vilas, J. L.; Ramírez-Aportela, E.; Sánchez-García, R.; Maluenda, D.; Vargas, J.; Herreros, D.; Fernández-Giménez, E.; d..." current
• 09:3109:31, 13 December 2021 diff hist +57 Main Page →Software

10 December 2021

• 16:1116:11, 10 December 2021 diff hist −46 Main Page →Electron tomography

26 November 2021

• 06:2406:24, 26 November 2021 diff hist −73 Main Page →Image formation

25 November 2021

• 13:4013:40, 25 November 2021 diff hist +1,682 N 2021Nakasako Landscape Created page with "== Citation == Nakasako, M. Energy Landscape and Hydration of Proteins. Hydration Structures of Proteins, Springer, 2021, 229-250 == Abstract == At cryogenic temperature,..." current
• 13:3913:39, 25 November 2021 diff hist +94 Main Page →3D Heterogeneity
• 13:2513:25, 25 November 2021 diff hist +1,247 N 2021Bieber FIBET Created page with "== Citation == Bieber, A.; Capitanio, C.; Wilfling, F.; Plitzko, J. & Erdmann, P. S. Sample Preparation by 3D-Correlative Focused Ion Beam Milling for High-Resolution Cry..." current
• 13:2413:24, 25 November 2021 diff hist +95 Main Page →Sample preparation

19 November 2021

• 12:1212:12, 19 November 2021 diff hist +159 Main Page →Electron microscopy images

12 November 2021

• 08:2708:27, 12 November 2021 diff hist +2,443 N 2021Harastani NMA Created page with "== Citation == Harastani, M.; Eltsov, M.; Leforestier, A. & Jonic, S. HEMNMA-3D: Cryo Electron Tomography Method Based on Normal Mode Analysis to Study Continuous Conform..." current
• 08:2508:25, 12 November 2021 diff hist +86 Main Page →Subtomogram analysis
• 08:0708:07, 12 November 2021 diff hist +1,587 N 2022Naydenova Grid Created page with "== Citation == Naydenova, K. & Russo, C. J. Integrated wafer-scale manufacturing of electron cryomicroscopy specimen supports. Ultramicroscopy, 2022, 232, 113396 == Abs..." current
• 08:0708:07, 12 November 2021 diff hist +121 Main Page →Sample preparation
• 07:3707:37, 12 November 2021 diff hist +1,598 N 2022Ecoffet MorphOT Created page with "== Citation == Ecoffet, A.; Woollard, G.; Kushner, A.; Poitevin, F. & Duc, K. D. Application of transport-based metric for continuous interpolation between cryo-EM densit..." current
• 07:3507:35, 12 November 2021 diff hist +95 Main Page →3D Heterogeneity

11 November 2021

• 16:0616:06, 11 November 2021 diff hist +602 N 2021Egerton Inelastic Created page with "== Citation == Egerton, R.; Blackburn, A.; Herring, R.; Wu, L. & Zhu, Y. Direct measurement of the PSF for Coulomb delocalization--a reconsideration. Ultramicroscopy, 202..." current
• 15:5915:59, 11 November 2021 diff hist +71 Main Page →Image formation

8 November 2021

• 12:4512:45, 8 November 2021 diff hist +1,460 N 2021Fernandez TomoAlign Created page with "== Citation == Fernandez, J.-J. & Li, S. TomoAlign: A novel approach to correcting sample motion and 3D CTF in CryoET. J. Structural Biology, 2021, 213, 107778 == Abstr..." current
• 12:4412:44, 8 November 2021 diff hist −48 Main Page →3D reconstruction
• 12:4412:44, 8 November 2021 diff hist +98 Main Page →3D reconstruction
• 12:1612:16, 8 November 2021 diff hist +1,737 N 2021Vuillemot NMA Created page with "== Citation == Vuillemot, R. & Jonic, S. Combined Bayesian and Normal Mode Flexible Fitting with Hamiltonian Monte Carlo Sampling for Cryo Electron Microscopy. 29th Europ..." current
• 12:1512:15, 8 November 2021 diff hist +80 Main Page →Fitting and docking
• 12:1412:14, 8 November 2021 diff hist +5 Main Page →3D Heterogeneity
• 12:0712:07, 8 November 2021 diff hist +1,537 N 2021Hamitouche NMADL Created page with "== Citation == Hamitouche, I. & Jonic, S. Deep learning of elastic 3D shapes for cryo electron microscopy analysis of continuous conformational changes of biomolecules. 2..." current
• 12:0612:06, 8 November 2021 diff hist +114 Main Page →3D Heterogeneity
• 11:5211:52, 8 November 2021 diff hist +1,921 N 2021Lucas Cistem Created page with "== Citation == Lucas, B. A.; Himes, B. A.; Xue, L.; Grant, T.; Mahamid, J. & Grigorieff, N. Locating macromolecular assemblies in cells by 2D template matching with cisTE..." current
• 11:5111:51, 8 November 2021 diff hist +91 Main Page →Subtomogram analysis
• 11:2311:23, 8 November 2021 diff hist +1,419 N 2021He EMNUSS Created page with "== Citation == He, J. & Huang, S.-Y. EMNUSS: a deep learning framework for secondary structure annotation in cryo-EM maps. Briefings in bioinformatics, 2021, bbab156 ==..." current
• 11:2211:22, 8 November 2021 diff hist +115 Main Page →Segmentation
• 10:5710:57, 8 November 2021 diff hist +1,566 N 2021Chen Fast Created page with "== Citation == Chen, Y.-X.; Xie, R.; Yang, Y.; He, L.; Feng, D. & Shen, H.-B. Fast Cryo-EM Image Alignment Algorithm Using Power Spectrum Features. J. Chemical Informatio..." current
• 10:5610:56, 8 November 2021 diff hist +73 Main Page →2D Alignment
• 10:2710:27, 8 November 2021 diff hist +5 Main Page →2D Preprocessing
• 09:5409:54, 8 November 2021 diff hist +1,031 N 2021Rao Wasserstein Created page with "== Citation == Rao, R.; Moscovich, A. & Singer, A. Wasserstein K-Means for Clustering Tomographic Projections. Proc. Machine Learning for Structural Biology Workshop, 202..." current
• 09:5309:53, 8 November 2021 diff hist +105 Main Page →2D Classification and clustering
• 09:5209:52, 8 November 2021 diff hist −100 Main Page →2D Alignment
• 09:5209:52, 8 November 2021 diff hist +99 Main Page →2D Alignment
• 09:4509:45, 8 November 2021 diff hist +1,801 N 2021Chung CryoRALIB Created page with "== Citation == Chung, S.-C.; Hung, C.-Y.; Siao, H.-L.; Wu, H.-Y.; Chang, W.-H. & Tu, I.-P. Cryo-Ralib-A Modular Library for Accelerating Alignment in CRYO-EM. 2021 IEEE I..." current
• 09:4409:44, 8 November 2021 diff hist +76 Main Page →2D Alignment