User contributions for WikiSysop

10 January 2023

• 08:4808:48, 10 January 2023 diff hist +2,641 N 2022Heymann PSSNR Created page with "== Citation == Heymann, J. Bernard. The progressive spectral signal-to-noise ratio of cryo-electron micrograph movies as a tool to assess quality and radiation damage. 2022,..." current
• 08:3908:39, 10 January 2023 diff hist +121 Main Page →Image formation

14 December 2022

• 07:5107:51, 14 December 2022 diff hist +2,476 N 2022Westbrook mmCIF Created page with "== Citation == Westbrook, John D. / Young, Jasmine Y. / Shao, Chenghua / Feng, Zukang / Guranovic, Vladimir / Lawson, Catherine L. / Vallat, Brinda / Adams, Paul D. / Berrisf..." current
• 07:4807:48, 14 December 2022 diff hist +62 Main Page →Databases

12 December 2022

• 07:1707:17, 12 December 2022 diff hist −90 Main Page →Sample preparation
• 07:1107:11, 12 December 2022 diff hist +90 Main Page →Sample preparation

2 December 2022

• 06:5406:54, 2 December 2022 diff hist +4 Main Page →Online courses and Learning material
• 06:5206:52, 2 December 2022 diff hist +54 Main Page →Online courses and Learning material

23 November 2022

• 08:2308:23, 23 November 2022 diff hist +1,372 N 2022Hryc Pathwalking Created page with "== Citation == Hryc, Corey F. / Baker, Matthew L. Beyond the Backbone: The Next Generation of Pathwalking Utilities for Model Building in CryoEM Density Maps. 2022, Biomolecu..." current
• 08:2208:22, 23 November 2022 diff hist +75 Main Page →Fitting and docking
• 08:1108:11, 23 November 2022 diff hist +1,418 N 2022Hagen Screening Created page with "== Citation == Hagen, Wim J. H. Light ‘Em up: Efficient Screening of Gold Foil Grids in Cryo-EM. 2022, Frontiers in Molecular Biosciences, Vol. 9, p. 912363 == Abstract ==..." current
• 08:1008:10, 23 November 2022 diff hist +110 Main Page →Automated data collection
• 07:5107:51, 23 November 2022 diff hist +1,748 N 2022Flutty bits Created page with "== Citation == Fluty, Adam C. / Ludtke, Steven J. Precision requirements and data compression in CryoEM/CryoET. 2022, Journal of Structural Biology, Vol. 214, No. 3, p. 10787..." current
• 07:5007:50, 23 November 2022 diff hist +66 Main Page →Automated data collection

21 November 2022

• 07:2407:24, 21 November 2022 diff hist +1,919 N 2022Liu Review Created page with "== Citation == Liu, H.-F. / Zhou, Ye / Bartesaghi, Alberto. High-resolution structure determination using high-throughput electron cryo-tomography, 2022, Acta Crystallographi..." current
• 07:1807:18, 21 November 2022 diff hist +89 Main Page →Books and reviews

9 June 2022

• 14:5514:55, 9 June 2022 diff hist +2,127 N 2022Sorzano 1000 Created page with "== Citation == Sorzano, C. O. S. / Carazo, J. M. Cryo-Electron Microscopy: The field of 1,000^+ methods. 2022. Journal of structural biology, Vol. 214, p. 107861 == Abstract..." current
• 14:5314:53, 9 June 2022 diff hist +74 Main Page →Books and reviews
• 14:4914:49, 9 June 2022 diff hist +2,364 N 2022DiIorio Multiple Created page with "== Citation == DiIorio, Megan C. / Kulczyk, Arkadiusz W. A Robust Single-Particle Cryo-Electron Microscopy (cryo-EM) Processing Workflow with cryoSPARC, RELION, and Scipion...." current
• 14:4714:47, 9 June 2022 diff hist +159 Main Page →Software
• 14:4314:43, 9 June 2022 diff hist +1,342 N 2022Waarshamanage EMDA Created page with "== Citation == Warshamanage, Rangana / Yamashita, Keitaro / Murshudov, Garib N. EMDA: A Python package for Electron Microscopy Data Analysis. 2022. Journal of structural biol..." current
• 14:4214:42, 9 June 2022 diff hist +89 Main Page →Validation
• 14:3914:39, 9 June 2022 diff hist −2 2022Frangakis Curvature →Abstract current
• 14:3814:38, 9 June 2022 diff hist +1,510 N 2022Frangakis Curvature Created page with "== Citation == Frangakis, Achilleas S. Mean curvature motion facilitates the segmentation and surface visualization of electron tomograms. 2022. Journal of structural biology..."
• 14:3714:37, 9 June 2022 diff hist +115 Main Page →Segmentation
• 14:3314:33, 9 June 2022 diff hist +1,894 N 2022Levitz Chameleon Created page with "== Citation == Levitz, Talya S. / Brignole, Edward J. / Fong, Ivan / Darrow, Michele C. / Drennan, Catherine L. Effects of chameleon dispense-to-plunge speed on particle conc..." current
• 14:3114:31, 9 June 2022 diff hist +144 Main Page →Sample preparation
• 14:2714:27, 9 June 2022 diff hist +1,454 N 2022Zhu ElectronCounting Created page with "== Citation == Zhu, Dongjie / Shi, Huigang / Wu, Chunling / Zhang, Xinzheng. An electron counting algorithm improves imaging of proteins with low-acceleration-voltage cryo-el..." current
• 14:2514:25, 9 June 2022 diff hist +100 Main Page →Automated data collection
• 14:1814:18, 9 June 2022 diff hist +1,646 N 2022Zhang EPicker Created page with "== Citation == Zhang, Xinyu / Zhao, Tianfang / Chen, Jiansheng / Shen, Yuan / Li, Xueming. EPicker is an exemplar-based continual learning approach for knowledge accumulation..." current
• 14:1714:17, 9 June 2022 diff hist +84 Main Page →Automatic particle picking
• 14:1414:14, 9 June 2022 diff hist +2,641 N 2022Heymann ProgressiveSSNR Created page with "== Citation == Heymann, J. Bernard. The progressive spectral signal-to-noise ratio of cryo-electron micrograph movies as a tool to assess quality and radiation damage. 2022...." current
• 14:1214:12, 9 June 2022 diff hist +105 Main Page →2D Preprocessing
• 14:0414:04, 9 June 2022 diff hist +2,591 N 2022Wang EMDB Created page with "== Citation == Wang, Zhe / Patwardhan, Ardan / Kleywegt, Gerard J. Validation analysis of EMDB entries. 2022. Acta crystallographica. Section D, Structural biology, Vol. 78,..." current
• 14:0114:01, 9 June 2022 diff hist +71 Main Page →Databases
• 13:5513:55, 9 June 2022 diff hist +1,522 N 2022Dickerson Inelastic Created page with "== Citation == Dickerson, Joshua L. / Lu, Peng-Han / Hristov, Dilyan / Dunin-Borkowski, Rafal E. / Russo, Christopher J. Imaging biological macromolecules in thick specimens:..." current
• 13:5413:54, 9 June 2022 diff hist +97 Main Page →Image formation
• 13:5013:50, 9 June 2022 diff hist +1,695 N 2022Peck Montage Created page with "== Citation == Peck, Ariana / Carter, Stephen D. / Mai, Huanghao / Chen, Songye / Burt, Alister / Jensen, Grant J. Montage electron tomography of vitrified specimens. 2022. J..." current
• 13:4813:48, 9 June 2022 diff hist +66 Main Page →Automated data collection
• 13:4313:43, 9 June 2022 diff hist +2,196 N 2022Zhou Data Created page with "== Citation == Zhou, Ye / Moscovich, Amit / Bartesaghi, Alberto. Data-driven determination of number of discrete conformations in single-particle cryo-EM. 2022. Computer Meth..." current
• 13:4113:41, 9 June 2022 diff hist +86 Main Page →3D Heterogeneity
• 13:2713:27, 9 June 2022 diff hist +2,143 N 2022Wang Spectral Created page with "== Citation == Wang, Xiangwen / Lu, Yonggang / Lin, Xianghong. Heterogeneous cryo-EM projection image classification using a two-stage spectral clustering based on novel dist..." current
• 13:2513:25, 9 June 2022 diff hist +82 Main Page →2D Classification and clustering

3 May 2022

• 12:2412:24, 3 May 2022 diff hist +2,445 N 2022Behkamal LPTD Created page with "== Citation == Behkamal, Bahareh / Naghibzadeh, Mahmoud / Pagnani, Andrea / Saberi, Mohammad Reza / Al Nasr, Kamal. LPTD: A Novel Linear Programming-based Topology Determinat..." current
• 12:2212:22, 3 May 2022 diff hist +84 Main Page →Fitting and docking
• 12:1812:18, 3 May 2022 diff hist +2,205 N 2020Yokoyama Good Created page with "== Citation == Yokoyama, Yuichi / Terada, Tohru / Shimizu, Kentaro / Nishikawa, Kouki / Kozai, Daisuke / Shimada, Atsuhiro / Mizoguchi, Akira / Fujiyoshi, Yoshinori / Tani, K..." current
• 12:1612:16, 3 May 2022 diff hist +93 Main Page →Automated data collection
• 12:1212:12, 3 May 2022 diff hist +1,654 N 2022Lu SphericalEmbeddings Created page with "== Citation == Lu, Yonggang / Liu, Jiaxuan / Zhu, Li / Zhang, Bianlan / He, Jing. 3D reconstruction from cryo-EM projection images using two spherical embeddings. 2022. Commu..." current
• 12:1112:11, 3 May 2022 diff hist +113 Main Page →3D Alignment
• 12:0412:04, 3 May 2022 diff hist +2,263 N 2022Peters Feature Created page with "== Citation == Peters, John Jacob / Leitz, Jeremy / Guo, Qiang / Beck, Florian / Baumeister, Wolfgang / Brunger, Axel T. A feature-guided, focused 3D signal permutation metho..." current