User contributions for WikiSysop

12 June 2023

• 06:4306:43, 12 June 2023 diff hist +81 Main Page →Software
• 06:4006:40, 12 June 2023 diff hist +1,748 N 2022Fluty Precision Created page with "== Citation == Fluty, Adam C. / Ludtke, Steven J. Precision requirements and data compression in CryoEM/CryoET. 2022. Journal of Structural Biology, Vol. 214, No. 3, p. 10787..." current
• 06:4006:40, 12 June 2023 diff hist +85 Main Page →Software
• 06:3606:36, 12 June 2023 diff hist +1,438 N 2022Russo Review Created page with "== Citation == Russo, Christopher J. / Dickerson, Joshua L. / Naydenova, Katerina Cryomicroscopy in situ: what is the smallest molecule that can be directly identified witho..." current
• 06:3506:35, 12 June 2023 diff hist +73 Main Page →Sample preparation

7 June 2023

• 18:3318:33, 7 June 2023 diff hist +1,515 N 2022Terashi DAQ Created page with "== Citation == Terashi, Genki / Wang, Xiao / Maddhuri Venkata Subramaniya, Sai Raghavendra / Tesmer, John J. G. / Kihara, Daisuke Residue-wise local quality estimation for p..." current
• 18:3218:32, 7 June 2023 diff hist +82 Main Page →Validation

24 January 2023

• 08:3308:33, 24 January 2023 diff hist +1,538 N 2022He EMBuild Created page with "== Citation == He, Jiahua / Lin, Peicong / Chen, Ji / Cao, Hong / Huang, Sheng-You. Model building of protein complexes from intermediate-resolution cryo-EM maps with deep le..." current
• 08:3208:32, 24 January 2023 diff hist +80 Main Page →Fitting and docking
• 08:2308:23, 24 January 2023 diff hist +2,054 N 2022Kulik TAAM Created page with "== Citation == Kulik, Marta / Chodkiewicz, Michał Leszek / Dominiak, Paulina Maria. Theoretical 3D electron diffraction electrostatic potential maps of proteins modeled with..." current
• 08:2208:22, 24 January 2023 diff hist +113 Main Page →Image formation

23 January 2023

• 08:3408:34, 23 January 2023 diff hist +1,701 N 2022Moebel unsupervised Created page with "== Citation == Moebel, E. / Kervrann, C. Towards unsupervised classification of macromolecular complexes in cryo electron tomography: Challenges and opportunities, 2022, Com..." current
• 08:3308:33, 23 January 2023 diff hist +110 Main Page →Subtomogram analysis
• 08:2608:26, 23 January 2023 diff hist +2,757 N 2022Lamm MemBrain Created page with "== Citation == Lamm, L. / Righetto, R. D. / Wietrzynski, W. / Pöge, M. / Martinez-Sanchez, A. / Peng, T. / Engel, B. MemBrain: A deep learning-aided pipeline for detection o..." current
• 08:2408:24, 23 January 2023 diff hist +81 Main Page →Segmentation

20 January 2023

• 07:5807:58, 20 January 2023 diff hist +2,647 N 2022Hao Picking Created page with "== Citation == Hao, Yu / Wan, Xiaohua / Yan, Rui / Liu, Zhiyong / Li, Jintao / Zhang, Shihua / Cui, Xuefeng / Zhang, Fa. VP-Detector: A 3D multi-scale dense convolutional neu..." current
• 07:5707:57, 20 January 2023 diff hist +72 Main Page →Subtomogram analysis

16 January 2023

• 09:5609:56, 16 January 2023 diff hist +2,208 N 2022Martinez PyOrg Created page with "== Citation == Martinez-Sanchez, Antonio / Baumeister, Wolfgang / Lučić, Vladan. Statistical spatial analysis for cryo-electron tomography, 2022, Computer Methods and Progr..." current
• 09:5509:55, 16 January 2023 diff hist +92 Main Page →Software
• 09:4909:49, 16 January 2023 diff hist +2,165 N 2022Shi Denoising Created page with "== Citation == Shi, Y. / Singer, A. Ab-initio contrast estimation and denoising of cryo-EM images. 2022, Computer Methods and Programs in Biomedicine, Vol. 224: p. 107018 =..." current
• 09:0209:02, 16 January 2023 diff hist +79 Main Page →2D Preprocessing

10 January 2023

• 09:0309:03, 10 January 2023 diff hist +1,800 N 2022Gilles Wilson Created page with "== Citation == Gilles, Marc Aurèle / Singer, Amit. A molecular prior distribution for Bayesian inference based on Wilson statistics. 2022. Computer Methods and Programs in B..." current
• 09:0209:02, 10 January 2023 diff hist +120 Main Page →Sharpening of high resolution information
• 08:4808:48, 10 January 2023 diff hist +2,641 N 2022Heymann PSSNR Created page with "== Citation == Heymann, J. Bernard. The progressive spectral signal-to-noise ratio of cryo-electron micrograph movies as a tool to assess quality and radiation damage. 2022,..." current
• 08:3908:39, 10 January 2023 diff hist +121 Main Page →Image formation

14 December 2022

• 07:5107:51, 14 December 2022 diff hist +2,476 N 2022Westbrook mmCIF Created page with "== Citation == Westbrook, John D. / Young, Jasmine Y. / Shao, Chenghua / Feng, Zukang / Guranovic, Vladimir / Lawson, Catherine L. / Vallat, Brinda / Adams, Paul D. / Berrisf..." current
• 07:4807:48, 14 December 2022 diff hist +62 Main Page →Databases

12 December 2022

• 07:1707:17, 12 December 2022 diff hist −90 Main Page →Sample preparation
• 07:1107:11, 12 December 2022 diff hist +90 Main Page →Sample preparation

2 December 2022

• 06:5406:54, 2 December 2022 diff hist +4 Main Page →Online courses and Learning material
• 06:5206:52, 2 December 2022 diff hist +54 Main Page →Online courses and Learning material

23 November 2022

• 08:2308:23, 23 November 2022 diff hist +1,372 N 2022Hryc Pathwalking Created page with "== Citation == Hryc, Corey F. / Baker, Matthew L. Beyond the Backbone: The Next Generation of Pathwalking Utilities for Model Building in CryoEM Density Maps. 2022, Biomolecu..." current
• 08:2208:22, 23 November 2022 diff hist +75 Main Page →Fitting and docking
• 08:1108:11, 23 November 2022 diff hist +1,418 N 2022Hagen Screening Created page with "== Citation == Hagen, Wim J. H. Light ‘Em up: Efficient Screening of Gold Foil Grids in Cryo-EM. 2022, Frontiers in Molecular Biosciences, Vol. 9, p. 912363 == Abstract ==..." current
• 08:1008:10, 23 November 2022 diff hist +110 Main Page →Automated data collection
• 07:5107:51, 23 November 2022 diff hist +1,748 N 2022Flutty bits Created page with "== Citation == Fluty, Adam C. / Ludtke, Steven J. Precision requirements and data compression in CryoEM/CryoET. 2022, Journal of Structural Biology, Vol. 214, No. 3, p. 10787..." current
• 07:5007:50, 23 November 2022 diff hist +66 Main Page →Automated data collection

21 November 2022

• 07:2407:24, 21 November 2022 diff hist +1,919 N 2022Liu Review Created page with "== Citation == Liu, H.-F. / Zhou, Ye / Bartesaghi, Alberto. High-resolution structure determination using high-throughput electron cryo-tomography, 2022, Acta Crystallographi..." current
• 07:1807:18, 21 November 2022 diff hist +89 Main Page →Books and reviews

9 June 2022

• 14:5514:55, 9 June 2022 diff hist +2,127 N 2022Sorzano 1000 Created page with "== Citation == Sorzano, C. O. S. / Carazo, J. M. Cryo-Electron Microscopy: The field of 1,000^+ methods. 2022. Journal of structural biology, Vol. 214, p. 107861 == Abstract..." current
• 14:5314:53, 9 June 2022 diff hist +74 Main Page →Books and reviews
• 14:4914:49, 9 June 2022 diff hist +2,364 N 2022DiIorio Multiple Created page with "== Citation == DiIorio, Megan C. / Kulczyk, Arkadiusz W. A Robust Single-Particle Cryo-Electron Microscopy (cryo-EM) Processing Workflow with cryoSPARC, RELION, and Scipion...." current
• 14:4714:47, 9 June 2022 diff hist +159 Main Page →Software
• 14:4314:43, 9 June 2022 diff hist +1,342 N 2022Waarshamanage EMDA Created page with "== Citation == Warshamanage, Rangana / Yamashita, Keitaro / Murshudov, Garib N. EMDA: A Python package for Electron Microscopy Data Analysis. 2022. Journal of structural biol..." current
• 14:4214:42, 9 June 2022 diff hist +89 Main Page →Validation
• 14:3914:39, 9 June 2022 diff hist −2 2022Frangakis Curvature →Abstract current
• 14:3814:38, 9 June 2022 diff hist +1,510 N 2022Frangakis Curvature Created page with "== Citation == Frangakis, Achilleas S. Mean curvature motion facilitates the segmentation and surface visualization of electron tomograms. 2022. Journal of structural biology..."
• 14:3714:37, 9 June 2022 diff hist +115 Main Page →Segmentation
• 14:3314:33, 9 June 2022 diff hist +1,894 N 2022Levitz Chameleon Created page with "== Citation == Levitz, Talya S. / Brignole, Edward J. / Fong, Ivan / Darrow, Michele C. / Drennan, Catherine L. Effects of chameleon dispense-to-plunge speed on particle conc..." current
• 14:3114:31, 9 June 2022 diff hist +144 Main Page →Sample preparation