User contributions
From 3DEM-Methods
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- 10:33, 10 June 2021 (diff | hist) . . (+84) . . Main Page (→Fitting and docking)
- 08:58, 1 June 2021 (diff | hist) . . (+1,597) . . N 2008Rusu Interpolation (Created page with "== Citation == Rusu, M.; Birmanns, S. & Wriggers, W. Biomolecular pleiomorphism probed by spatial interpolation of coarse models. Bioinformatics, 2008, 24, 2460-2466 == Abs...") (current)
- 08:57, 1 June 2021 (diff | hist) . . (+120) . . Main Page (→Fitting and docking)
- 10:14, 27 May 2021 (diff | hist) . . (+2,034) . . N 2021Glaeser Fading (Created page with "== Citation == Glaeser, R. M.; Hagen, W. J.; Han, B.-G.; Henderson, R.; McMullan, G. & Russo, C. J. Defocus-dependent Thon-ring fading. Ultramicroscopy, 2021, 222, 113213...") (current)
- 10:09, 27 May 2021 (diff | hist) . . (+75) . . Main Page (→Image formation)
- 09:36, 27 May 2021 (diff | hist) . . (+1,968) . . N 2020Oroguchi (Created page with "== Citation == Oroguchi, T.; Oide, M.; Wakabayashi, T. & Nakasako, M. Assessment of Force Field Accuracy Using Cryogenic Electron Microscopy Data of Hyper-thermostable Gl...") (current)
- 09:35, 27 May 2021 (diff | hist) . . (+110) . . Main Page (→Fitting and docking)
- 09:26, 27 May 2021 (diff | hist) . . (+1,686) . . N 2021Beckers Interpretation (Created page with "== Citation == Beckers, M.; Mann, D. & Sachse, C. Structural interpretation of cryo-EM image reconstructions. Progress in biophysics and molecular biology, 2021, 160, 26-...") (current)
- 09:23, 27 May 2021 (diff | hist) . . (+113) . . Main Page (→Sharpening of high resolution information)
- 09:13, 27 May 2021 (diff | hist) . . (+1,631) . . N 2021Pfab DeepTracer (Created page with "== Citation == Pfab, J.; Phan, N. M. & Si, D. DeepTracer for fast de novo cryo-EM protein structure modeling and special studies on CoV-related complexes. PNAS, 2021, 118...") (current)
- 09:11, 27 May 2021 (diff | hist) . . (+104) . . Main Page (→Fitting and docking)
- 08:54, 27 May 2021 (diff | hist) . . (+1,506) . . N 2020Stabrin Transphire (Created page with "== Citation == Stabrin, M.; Schoenfeld, F.; Wagner, T.; Pospich, S.; Gatsogiannis, C. & Raunser, S. TranSPHIRE: automated and feedback-optimized on-the-fly processing for...") (current)
- 08:53, 27 May 2021 (diff | hist) . . (+123) . . Main Page (→Automated data collection)
- 08:27, 27 May 2021 (diff | hist) . . (+2,008) . . N 2020Nakane Atomic (Created page with "== Citation == Nakane, T.; Kotecha, A.; Sente, A.; McMullan, G.; Masiulis, S.; Brown, P. M.; Grigoras, I. T.; Malinauskaite, L.; Malinauskas, T.; Miehling, J. & others. S...") (current)
- 08:26, 27 May 2021 (diff | hist) . . (+84) . . Main Page (→Books and reviews)
- 08:18, 27 May 2021 (diff | hist) . . (+1,426) . . N 2020Tan ThroughGrid (Created page with "== Citation == Tan, Y. Z. & Rubinstein, J. L. Through-grid wicking enables high-speed cryoEM specimen preparation. Acta Crystallographica Section D: Structural Biology, 2...") (current)
- 08:14, 27 May 2021 (diff | hist) . . (+110) . . Main Page (→Sample preparation)
- 08:09, 27 May 2021 (diff | hist) . . (+1,890) . . N 2021Abrishami Localized (Created page with "== Citation == Abrishami, V.; Ilca, S. L.; Gomez-Blanco, J.; Rissanen, I.; de la Rosa-Trevín, J. M.; Reddy, V. S.; Carazo, J.-M. & Huiskonen, J. T. Localized reconstruct...") (current)
- 08:05, 27 May 2021 (diff | hist) . . (+143) . . Main Page (→3D Reconstruction)
- 07:57, 27 May 2021 (diff | hist) . . (+1,316) . . N 2021Punjani 3DVA (Created page with "== Citation == Punjani, A. & Fleet, D. J. 3D Variability Analysis: Resolving continuous flexibility and discrete heterogeneity from single particle cryo-EM. J. Structural Bio...") (current)
- 07:56, 27 May 2021 (diff | hist) . . (+74) . . Main Page (→3D Heterogeneity)
- 11:24, 26 May 2021 (diff | hist) . . (+1,964) . . N 2021Baldwin SCF (Created page with "== Citation == Baldwin, P. R. & Lyumkis, D. Tools for visualizing and analyzing Fourier space sampling in Cryo-EM. Progress in Biophysics and Molecular Biology, 2021, 160...") (current)
- 11:21, 26 May 2021 (diff | hist) . . (+84) . . Main Page (→Software)
- 11:15, 26 May 2021 (diff | hist) . . (+1,918) . . N 2020Bepler TopazDenoise (Created page with "== Citation == Bepler, T.; Kelley, K.; Noble, A. J. & Berger, B. Topaz-Denoise: general deep denoising models for cryoEM and cryoET. Nature communications, 2020, 11, 5208...") (current)
- 11:13, 26 May 2021 (diff | hist) . . (+93) . . Main Page (→2D Preprocessing)
- 11:05, 26 May 2021 (diff | hist) . . (+1,109) . . N 2021Chreifi FISE (Created page with "== Citation == Chreifi, G.; Chen, S. & Jensen, G. J. Rapid tilt-series method for cryo-electron tomography: Characterizing stage behavior during FISE acquisition. Journal...") (current)
- 11:03, 26 May 2021 (diff | hist) . . (+147) . . Main Page (→Automated data collection)
- 10:59, 26 May 2021 (diff | hist) . . (+728) . . N 2021Sorzano PCA (Created page with "== Citation == Sorzano, C. O. S. & Carazo, J. M. Principal component analysis is limited to low-resolution analysis in cryoEM. Acta Crystallographica Section D, 2021, 77...") (current)
- 10:56, 26 May 2021 (diff | hist) . . (+70) . . Main Page (→3D Heterogeneity)
- 09:47, 26 May 2021 (diff | hist) . . (+1,385) . . N 2019Eisenstein FISE (Created page with "== Citation == Eisenstein, F.; Danev, R. & Pilhofer, M. Improved applicability and robustness of fast cryo-electron tomography data acquisition. Journal of Structural Bio...") (current)
- 09:40, 26 May 2021 (diff | hist) . . (+129) . . Main Page (→Automated data collection)
- 09:38, 26 May 2021 (diff | hist) . . (+1,547) . . N 2018Ashtiani femtolitre (Created page with "== Citation == Ashtiani, D.; Venugopal, H.; Belousoff, M.; Spicer, B.; Mak, J.; Neild, A. & de Marco, A. Delivery of femtolitre droplets using surface acoustic wave based...") (current)
- 09:36, 26 May 2021 (diff | hist) . . (+151) . . Main Page (→Sample preparation)
- 18:14, 25 May 2021 (diff | hist) . . (+1,305) . . N 2018Palovcak Graphene (Created page with "== Citation == Palovcak, E.; Wang, F.; Zheng, S. Q.; Yu, Z.; Li, S.; Betegon, M.; Bulkley, D.; Agard, D. A. & Cheng, Y. A simple and robust procedure for preparing graphe...") (current)
- 18:13, 25 May 2021 (diff | hist) . . (+86) . . Main Page (→Sample preparation)
- 18:10, 25 May 2021 (diff | hist) . . (+1,940) . . N 2021Olek FDR (Created page with "== Citation == Olek, M. & Joseph, A. P. Cryo-EM Map--Based Model Validation Using the False Discovery Rate Approach. Frontiers in Molecular Biosciences, 2021, 8, 401 ==...") (current)
- 18:09, 25 May 2021 (diff | hist) . . (+111) . . Main Page (→Validation)
- 17:48, 25 May 2021 (diff | hist) . . (+1,544) . . N 2021Frechard Preparation (Created page with "== Citation == Frechard, A.; Sharov, G.; Werderer, M. & Schultz, P. Optimization of Sample Preparation for the Observation of Macromolecular Complexes by Electron (cryo-)...") (current)
- 17:47, 25 May 2021 (diff | hist) . . (+80) . . Main Page (→Sample preparation)
- 17:43, 25 May 2021 (diff | hist) . . (+2,377) . . N 2014Paavolainen Missing (Created page with "== Citation == Paavolainen, L.; Acar, E.; Tuna, U.; Peltonen, S.; Moriya, T.; Soonsawad, P.; Marjomäki, V.; Cheng, R. H. & Ruotsalainen, U. Compensation of missing w...") (current)
- 17:42, 25 May 2021 (diff | hist) . . (+79) . . Main Page (→3D reconstruction)
- 17:39, 25 May 2021 (diff | hist) . . (+1,713) . . N 2019Heymann Statistics (Created page with "== Citation == Heymann, J. B. Single-particle reconstruction statistics: a diagnostic tool in solving biomolecular structures by cryo-EM. Acta Crystallographica Section F: St...") (current)
- 17:37, 25 May 2021 (diff | hist) . . (+77) . . Main Page (→Resolution)
- 06:30, 6 May 2021 (diff | hist) . . (+1,465) . . N 2021Rheinberger IceThickness (Created page with "== Citation == Rheinberger, J.; Oostergetel, G.; Resch, G. P. & Paulino, C. Optimized cryo-EM data-acquisition workflow by sample-thickness determination. Acta crystallog...") (current)
- 06:28, 6 May 2021 (diff | hist) . . (+83) . . Main Page (→Automated data collection)
- 13:37, 29 April 2021 (diff | hist) . . (+1,619) . . N 2021Efremov ComaCorrected (Created page with "== Citation == Efremov, R. G. & Stroobants, A. Coma-corrected rapid single-particle cryo-EM data collection on the CRYO ARM 300. Acta Crystallographica Section D: Structu...") (current)
- 13:36, 29 April 2021 (diff | hist) . . (+128) . . Main Page (→Automated data collection)
- 13:26, 26 April 2021 (diff | hist) . . (+1,837) . . N 2021Kayama Multipurpose (Created page with "== Citation == Kayama, Y.; Burton-Smith, R. N.; Song, C.; Terahara, N.; Kato, T. & Murata, K. Below 3 Å structure of apoferritin using a multipurpose TEM with a side en...") (current)
- 13:24, 26 April 2021 (diff | hist) . . (+135) . . Main Page (→Automated data collection)
- 13:14, 26 April 2021 (diff | hist) . . (+1,429) . . N 2021Chojnowski quality (Created page with "== Citation == Chojnowski, G.; Sobolev, E.; Heuser, P. & Lamzin, V. S. The accuracy of protein models automatically built into cryo-EM maps with ARP/wARP. Acta crystallog...") (current)
- 13:13, 26 April 2021 (diff | hist) . . (+97) . . Main Page (→Fitting and docking)
- 05:45, 23 April 2021 (diff | hist) . . (+1,014) . . N 2021Han Vesper (Created page with "== Citation == Han, X.; Terashi, G.; Christoffer, C.; Chen, S. & Kihara, D. VESPER: global and local cryo-EM map alignment using local density vectors. Nature communicati...") (current)
- 05:44, 23 April 2021 (diff | hist) . . (+111) . . Main Page (→Fitting and docking)
- 09:49, 20 April 2021 (diff | hist) . . (+109) . . Main Page (→Online courses and Learning material)
- 10:00, 16 April 2021 (diff | hist) . . (+979) . . N 2021Titarenko LocalCorr (Created page with "== Citation == Titarenko, V. & Roseman, A. M. Theoretical and practical approaches to improve the performance of local correlation algorithms for volume data analysis and...") (current)
- 09:59, 16 April 2021 (diff | hist) . . (+102) . . Main Page (→Fitting and docking)
- 06:25, 16 April 2021 (diff | hist) . . (+1,833) . . N 2021Bouvette Bisect (Created page with "== Citation == Bouvette, J.; Liu, H.-F.; Du, X.; Zhou, Y.; Sikkema, A. P.; da Fonseca Rezende E Mello, J.; Klemm, B. P.; Huang, R.; Schaaper, R. M.; Borgnia, M. J. & Bart...") (current)
- 06:24, 16 April 2021 (diff | hist) . . (+155) . . Main Page (→Automated data collection)
- 15:33, 15 April 2021 (diff | hist) . . (-48) . . 2020Gupta MultiCryoGAN (current)
- 15:32, 15 April 2021 (diff | hist) . . (+1,593) . . N 2020Gupta MultiCryoGAN (Created page with "== Citation == Gupta, H.; Phan, T. H.; Yoo, J. & Unser, M. Multi-CryoGAN: Reconstruction of Continuous Conformations in Cryo-EM Using Generative Adversarial Networks. Eur...")
- 15:30, 15 April 2021 (diff | hist) . . (+131) . . Main Page (→3D Heterogeneity)
- 15:02, 15 April 2021 (diff | hist) . . (+1,086) . . N 2020Egelman Ice (Created page with "== Citation == Egelman, E. H. Cryo-EM: Ice Is Nice, but Good Ice Can Be Hard to Find. Biophysical journal, 2020, 118, 1238-1239 == Abstract == [From the text] What conclus...") (current)
- 15:00, 15 April 2021 (diff | hist) . . (+58) . . Main Page (→Sample preparation)
- 14:26, 15 April 2021 (diff | hist) . . (+2,308) . . N 2021Weis Strategies (Created page with "== Citation == Weis, F.; Hagen, W. J.; Schorb, M. & Mattei, S. Strategies for Optimization of Cryogenic Electron Tomography Data Acquisition. Journal of Visualized Experiment...") (current)
- 14:25, 15 April 2021 (diff | hist) . . (+119) . . Main Page (→Automated data collection)
- 13:12, 15 April 2021 (diff | hist) . . (+1,301) . . N 2020Seitz Polaris (Created page with "== Citation == Seitz, E. & Frank, J. POLARIS: Path of Least Action Analysis on Energy Landscapes. Journal of chemical information and modeling, 2020, 60, 2581-2590 == A...") (current)
- 13:10, 15 April 2021 (diff | hist) . . (+99) . . Main Page (→3D Heterogeneity)
- 10:41, 15 April 2021 (diff | hist) . . (+1,646) . . N 2020Dashti Landscape (Created page with "== Citation == Dashti, A.; Mashayekhi, G.; Shekhar, M.; Hail, D. B.; Salah, S.; Schwander, P.; des Georges, A.; Singharoy, A.; Frank, J. & Ourmazd, A. Retrieving function...") (current)
- 10:39, 15 April 2021 (diff | hist) . . (+104) . . Main Page (→3D Heterogeneity)
- 15:39, 12 April 2021 (diff | hist) . . (+1,043) . . N 2021Sharov Relion (Created page with "== Citation == Sharov, G.; Morado, D. R.; Carroni, M. & de la Rosa-Trev\in, J. M. Using RELION software within the Scipion framework. Acta Crystallographica Section D: St...") (current)
- 15:38, 12 April 2021 (diff | hist) . . (+68) . . Main Page (→Software)
- 15:18, 12 April 2021 (diff | hist) . . (+1,189) . . N 2021Terwilliger CryoID (Created page with "== Citation == Terwilliger, T. C.; Sobolev, O. V.; Afonine, P. V.; Adams, P. D.; Ho, C. M.; Li, X. & Zhou, Z. H. Protein identification from electron cryomicroscopy maps...") (current)
- 15:16, 12 April 2021 (diff | hist) . . (+112) . . Main Page (→Fitting and docking)
- 14:32, 12 April 2021 (diff | hist) . . (+1,507) . . N 2021Budell TimeResolved (Created page with "== Citation == Budell, W. C.; Allegri, L.; Dandey, V.; Potter, C. S. & Carragher, B. Cryo-Electron Microscopic Grid Preparation for Time-Resolved Studies using a Novel Ro...") (current)
- 14:28, 12 April 2021 (diff | hist) . . (+79) . . Main Page (→Sample preparation)
- 14:18, 12 April 2021 (diff | hist) . . (+1,439) . . N 2021Egelman Review (Created page with "== Citation == Egelman, E. H. & Wang, F. Cryo-EM is a powerful tool, but helical applications can have pitfalls. Soft matter, 2021, 17, 3291-3293 == Abstract == In str...") (current)
- 14:17, 12 April 2021 (diff | hist) . . (+96) . . Main Page (→Books and reviews)
- 13:34, 12 April 2021 (diff | hist) . . (+1,365) . . N 2021DImprima Review (Created page with "== Citation == D'Imprima, E. & Kühlbrandt, W. Current limitations to high-resolution structure determination by single-particle cryoEM. Quarterly Reviews of Biophysics,...") (current)
- 13:32, 12 April 2021 (diff | hist) . . (+99) . . Main Page (→Books and reviews)
- 18:19, 9 April 2021 (diff | hist) . . (+1,459) . . N 2021Feathers Superresolution (Created page with "== Citation == Feathers, J. R.; Spoth, K. A. & Fromme, J. C. Experimental evaluation of super-resolution imaging and magnification choice in single-particle cryo-EM. Jour...") (current)
- 18:16, 9 April 2021 (diff | hist) . . (+115) . . Main Page (→Automated data collection)
- 18:11, 9 April 2021 (diff | hist) . . (+1,584) . . N 2020Verbeke Separation (Created page with "== Citation == Verbeke, E. J.; Zhou, Y.; Horton, A. P.; Mallam, A. L.; Taylor, D. W. & Marcotte, E. M. Separating distinct structures of multiple macromolecular assemblie...") (current)
- 18:10, 9 April 2021 (diff | hist) . . (+94) . . Main Page (→3D Heterogeneity)
- 10:30, 8 April 2021 (diff | hist) . . (+1,932) . . N 2021Jimenez DeepAlign (Created page with "== Citation == Jiménez-Moreno, A.; Střelák, D.; Filipovič, J.; Carazo, J. M. & Sorzano, C. O. S. DeepAlign, a 3D Alignment Method based on Regio...") (current)
- 10:19, 8 April 2021 (diff | hist) . . (+81) . . Main Page (→3D Alignment)
- 10:37, 5 April 2021 (diff | hist) . . (-1) . . 2020Sharon NonUniformKam (→Links) (current)
- 10:35, 5 April 2021 (diff | hist) . . (+1) . . Main Page (→3D Alignment)
- 10:34, 5 April 2021 (diff | hist) . . (0) . . m 2020Sharon NonUniformKam (WikiSysop moved page 2020Singer NonUniformKam to 2020Sharon NonUniformKam: The index is constructed using the first author)
- 10:34, 5 April 2021 (diff | hist) . . (+38) . . N 2020Singer NonUniformKam (WikiSysop moved page 2020Singer NonUniformKam to 2020Sharon NonUniformKam: The index is constructed using the first author) (current)
- 08:07, 5 April 2021 (diff | hist) . . (+1,458) . . N 2021Tegunov M (Created page with "== Citation == Tegunov, D.; Xue, L.; Dienemann, C.; Cramer, P. & Mahamid, J. Multi-particle cryo-EM refinement with M visualizes ribosome-antibiotic complex at 3.5 Å...") (current)
- 08:05, 5 April 2021 (diff | hist) . . (+20) . . Main Page (→Subtomogram analysis)
- 08:05, 5 April 2021 (diff | hist) . . (+76) . . Main Page (→Subtomogram analysis)
- 07:38, 5 April 2021 (diff | hist) . . (+1,620) . . N 2020Hu Quaternions (Created page with "== Citation == Hu, M.; Zhang, Q.; Yang, J. & Li, X. Unit quaternion description of spatial rotations in 3D electron cryo-microscopy. J. Structural Biology, 2020, 212, 107...") (current)
- 07:33, 5 April 2021 (diff | hist) . . (+95) . . Main Page (→Books and reviews)
- 11:18, 24 March 2021 (diff | hist) . . (+1) . . Main Page (→3D Reconstruction)
- 19:22, 4 March 2021 (diff | hist) . . (0) . . Main Page (→Sharpening of high resolution information)
- 19:21, 4 March 2021 (diff | hist) . . (0) . . m 2020Ramirez LocalDeblur (WikiSysop moved page 2019Ramirez LocalDeblur to 2020Ramirez LocalDeblur) (current)
- 19:21, 4 March 2021 (diff | hist) . . (+37) . . N 2019Ramirez LocalDeblur (WikiSysop moved page 2019Ramirez LocalDeblur to 2020Ramirez LocalDeblur) (current)
- 19:21, 4 March 2021 (diff | hist) . . (+2,139) . . N 2020Ramirez LocalDeblur (Created page with "== Citation == Ram\irez-Aportela, E.; Vilas, J. L.; Glukhova, A.; Melero, R.; Conesa, P.; Mart\inez, M.; Maluenda, D.; Mota, J.; Jiménez, A.; Vargas, J.; Marabini, R.; Sexto...")
- 19:20, 4 March 2021 (diff | hist) . . (+80) . . Main Page (→Sharpening of high resolution information)
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