User contributions
From 3DEM-Methods
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- 07:42, 10 January 2024 (diff | hist) . . (+122) . . Main Page (→Software)
- 07:41, 10 January 2024 (diff | hist) . . (+1) . . Main Page (→Fitting and docking)
- 08:51, 9 January 2024 (diff | hist) . . (+818) . . N 2023Bai Challenges (Created page with "== Citation == Bai, Xiao-chen / Gonen, Tamir / Gronenborn, Angela M. / Perrakis, Anastassis / Thorn, Andrea / Yang, Jianyi. Challenges and opportunities in macromolecular str...") (current)
- 08:50, 9 January 2024 (diff | hist) . . (+95) . . Main Page (→Books and reviews)
- 08:33, 9 January 2024 (diff | hist) . . (+1,730) . . N 2023Balyschew TomoBEAR (Created page with "== Citation == Balyschew, Nikita / Yushkevich, Artsemi / Mikirtumov, Vasilii / Sanchez, Ricardo M. / Sprink, Thiemo / Kudryashev, Mikhail. Streamlined structure determination...") (current)
- 08:31, 9 January 2024 (diff | hist) . . (+117) . . Main Page (→Subtomogram analysis)
- 08:28, 9 January 2024 (diff | hist) . . (+1,495) . . N 2023Wang CryoREAD (Created page with "== Citation == Wang, Xiao / Terashi, Genki / Kihara, Daisuke. CryoREAD: De novo structure modeling for nucleic acids in cryo-EM maps using deep learning. 2023. Nature Methods...") (current)
- 08:25, 9 January 2024 (diff | hist) . . (+84) . . Main Page (→Fitting and docking)
- 07:30, 8 January 2024 (diff | hist) . . (+1,367) . . N 2023Strelak MovieAlignment (Created page with "== Citation == Střelák, David / Marchán, Daniel / Carazo, José Mar\ia / S. Sorzano, Carlos O. Performance and Quality Comparison of Movie Alignment Software for Cryogenic...") (current)
- 07:28, 8 January 2024 (diff | hist) . . (+87) . . Main Page (→2D Preprocessing)
- 07:26, 8 January 2024 (diff | hist) . . (+2,072) . . N 2023Fernandez Subtraction (Created page with "== Citation == Fernandez-Gimenez, Estrella / Mart\inez, M. M. / Marabini, R. / Strelak, D. / Sánchez-Garc\ia, R. / Carazo, J. M. / Sorzano, C. O. S. A new algorithm for part...") (current)
- 07:25, 8 January 2024 (diff | hist) . . (+119) . . Main Page (→3D Heterogeneity)
- 07:21, 8 January 2024 (diff | hist) . . (+1,450) . . N 2023Cheng GisSPA (Created page with "== Citation == Cheng, Jing / Liu, Tong / You, Xin / Zhang, Fa / Sui, Sen-Fang / Wan, Xiaohua / Zhang, Xinzheng. Determining protein structures in cellular lamella at pseudo-a...") (current)
- 07:21, 8 January 2024 (diff | hist) . . (+84) . . Main Page (→Subtomogram analysis)
- 07:11, 8 January 2024 (diff | hist) . . (+1,463) . . N 2021Cheng Native (Created page with "== Citation == Cheng, Jing / Li, Bufan / Si, Long / Zhang, Xinzheng. Determining structures in a native environment using single-particle cryoelectron microscopy images. 2021...") (current)
- 07:10, 8 January 2024 (diff | hist) . . (+79) . . Main Page (→Subtomogram analysis)
- 08:23, 5 January 2024 (diff | hist) . . (+1,912) . . N 2023Basanta Graphene (Created page with "== Citation == Basanta, Benjamin / Chen, Wenqian / Pride, Daniel E. / Lander, Gabriel C. Fabrication of Monolayer Graphene-Coated Grids forCryoelectron Microscopy. 2023. JoVE...") (current)
- 08:22, 5 January 2024 (diff | hist) . . (+89) . . Main Page (→Sample preparation)
- 08:08, 5 January 2024 (diff | hist) . . (+1,201) . . N 2023Miyashita MD (Created page with "== Citation == Miyashita, Osamu / Tama, Florence. Advancing cryo-electron microscopy data analysis through accelerated simulation-based flexible fitting approaches. 2023. Cur...") (current)
- 08:06, 5 January 2024 (diff | hist) . . (+97) . . Main Page (→Books and reviews)
- 08:00, 4 January 2024 (diff | hist) . . (+2,121) . . N 2023Barchet Focused (Created page with "== Citation == Barchet, Charles / Fréchin, Léo / Holvec, Samuel / Hazemann, Isabelle / von Loeffelholz, Ottilie / Klaholz, Bruno P. Focused classifications and refinements...") (current)
- 07:59, 4 January 2024 (diff | hist) . . (+110) . . Main Page (→3D Heterogeneity)
- 07:47, 4 January 2024 (diff | hist) . . (+1,967) . . N 2023Chaillet Extensive (Created page with "== Citation == Chaillet, Marten L. / van der Schot, Gijs / Gubins, Ilja / Roet, Sander / Veltkamp, Remco C. / Förster, Friedrich. Extensive angular sampling enables the sens...") (current)
- 07:46, 4 January 2024 (diff | hist) . . (+95) . . Main Page (→Subtomogram analysis)
- 07:41, 4 January 2024 (diff | hist) . . (+1,465) . . N 2023Venien Membrane (Created page with "== Citation == Vénien-Bryan, Catherine / Fernandes, Carlos A. H. Overview of Membrane Protein Sample Preparation for Single-Particle Cryo-Electron Microscopy Analysis. 2023....") (current)
- 07:36, 4 January 2024 (diff | hist) . . (+87) . . Main Page (→Sample preparation)
- 07:59, 3 January 2024 (diff | hist) . . (+1,510) . . N 2023Torino TimeResolved (Created page with "== Citation == Torino, Stefania / Dhurandhar, Mugdha / Stroobants, Annelore / Claessens, Raf / Efremov, Rouslan G. Time-resolved cryo-EM using a combination of droplet micro...") (current)
- 07:58, 3 January 2024 (diff | hist) . . (+107) . . Main Page (→Sample preparation)
- 07:54, 3 January 2024 (diff | hist) . . (+1,564) . . N 2023Park CSA (Created page with "== Citation == Park, Jimin / Joung, InSuk / Joo, Keehyoung / Lee, Jooyoung Application of conformational space annealing to the protein structure modeling using cryo-EM maps...") (current)
- 09:53, 2 January 2024 (diff | hist) . . (+91) . . Main Page (→Fitting and docking)
- 19:27, 30 November 2023 (diff | hist) . . (+103) . . Main Page (→Online courses and Learning material)
- 07:31, 19 October 2023 (diff | hist) . . (+1,554) . . N 2023Rangan AbInitio (Created page with "== Citation == Rangan, Aaditya V. / Greengard, Leslie. Robust ab initio solution of the cryo-EM reconstruction problem at low resolution with small data sets. 2023. J. Struct...") (current)
- 07:14, 19 October 2023 (diff | hist) . . (+73) . . Main Page (→3D Reconstruction)
- 07:09, 19 October 2023 (diff | hist) . . (+1,158) . . N 2023Han Sample (Created page with "== Citation == Han, Bong-Gyoon / Avila-Sakar, Agustin / Remis, Jonathan / Glaeser, Robert M. Challenges in making ideal cryo-EM samples. 2023. Current Opinion in Structural B...") (current)
- 07:06, 19 October 2023 (diff | hist) . . (+79) . . Main Page (→Sample preparation)
- 07:39, 26 September 2023 (diff | hist) . . (+1,322) . . N 2023Lucas Structureome (Created page with "== Citation == Lucas, Bronwyn A. Visualizing everything, everywhere, all at once: Cryo-EM and the new field of structureomics. 2023. Current Opinion in Structural Biology, Vo...") (current)
- 07:38, 26 September 2023 (diff | hist) . . (+122) . . Main Page (→Books and reviews)
- 08:22, 22 September 2023 (diff | hist) . . (+1,504) . . N 2023Maddhuri EMGan (Created page with "== Citation == Maddhuri Venkata Subramaniya, Sai Raghavendra / Terashi, Genki / Kihara, Daisuke. Enhancing cryo-EM maps with 3D deep generative networks for assisting protein...") (current)
- 08:12, 22 September 2023 (diff | hist) . . (+74) . . Main Page (→Sharpening of high resolution information)
- 08:08, 21 September 2023 (diff | hist) . . (+1,775) . . N 2023Blau FittingML (Created page with "== Citation == Blau, Christian / Yvonnesdotter, Linnea / Lindahl, Erik. Gentle and fast all-atom model refinement to cryo-EM densities via a maximum likelihood approach. 2023...") (current)
- 08:07, 21 September 2023 (diff | hist) . . (+96) . . Main Page (→Fitting and docking)
- 07:59, 21 September 2023 (diff | hist) . . (+1,453) . . N 2023Tang Conformational (Created page with "== Citation == Tang, Wai Shing / Zhong, Ellen D. / Hanson, Sonya M. / Thiede, Erik H. / Cossio, Pilar. Conformational heterogeneity and probability distributions from single-...") (current)
- 07:58, 21 September 2023 (diff | hist) . . (+113) . . Main Page (→Books and reviews)
- 07:51, 21 September 2023 (diff | hist) . . (+1,608) . . N 2023Short MRC2020 (Created page with "== Citation == Short, J. M. / Palmer, C. M. / Burnley, T. / Winn, M. D. / Zhang, Q. / Venkataram Prasad, B. V. / Chen, S. / Crowther, R. A. / Unwin, P. N. T. / Henderson, R....") (current)
- 07:50, 21 September 2023 (diff | hist) . . (+110) . . Main Page (→Software)
- 06:38, 20 September 2023 (diff | hist) . . (+2,741) . . N 2023Conesa Scipion3 (Created page with "== Citation == Conesa, Pablo / Fonseca, Yunior C. / de la Morena, Jorge Jiménez / Sharov, Grigory / de la Rosa-Trev\in, Jose Miguel / Cuervo, Ana / Mena, Alberto Garc\ia / d...") (current)
- 06:35, 20 September 2023 (diff | hist) . . (+80) . . Main Page (→Software)
- 06:12, 20 September 2023 (diff | hist) . . (+1,571) . . N 2023Genthe PickYolo (Created page with "== Citation == Genthe, Erik / Miletic, Sean / Tekkali, Indira / James, Rory Hennell / Marlovits, Thomas C. / Heuser, Philipp. PickYOLO: Fast deep learning particle detector f...") (current)
- 06:10, 20 September 2023 (diff | hist) . . (+73) . . Main Page (→Subtomogram analysis)
- 07:07, 14 September 2023 (diff | hist) . . (+1,799) . . N 2023Vuillemot MDTOMO (Created page with "== Citation == Vuillemot, Rémi / Rouiller, Isabelle / Jonić, Slavica. MDTOMO method for continuous conformational variability analysis in cryo electron subtomograms based o...") (current)
- 07:06, 14 September 2023 (diff | hist) . . (+109) . . Main Page (→Molecular 3D dynamics)
- 08:59, 13 September 2023 (diff | hist) . . (+1,635) . . N 2023Dhakal CryoPPP (Created page with "== Citation == Dhakal, Ashwin / Gyawali, Rajan / Wang, Liguo / Cheng, Jianlin. A large expert-curated cryo-EM image dataset for machine learning protein particle picking. 202...") (current)
- 08:54, 13 September 2023 (diff | hist) . . (+79) . . Main Page (→Automatic particle picking)
- 08:45, 13 September 2023 (diff | hist) . . (-118) . . Main Page (→Fitting and docking)
- 08:43, 13 September 2023 (diff | hist) . . (+118) . . Main Page (→Fitting and docking)
- 07:14, 11 September 2023 (diff | hist) . . (+1,613) . . N 2023Herreros Hub (Created page with "== Citation == Herreros, D. / Krieger, J. M. / Fonseca, Y. / Conesa, P. / Harastani, M. / Vuillemot, R. / Hamitouche, I. / Serrano Gutiérrez, R. / Gragera, M. / Melero, R. /...") (current)
- 07:14, 11 September 2023 (diff | hist) . . (+108) . . Main Page (→3D Heterogeneity)
- 16:22, 7 September 2023 (diff | hist) . . (+1,913) . . N 2017Barnett Marching (Created page with "== Citation == Barnett, Alex / Greengard, Leslie / Pataki, Andras / Spivak, Marina. Rapid solution of the cryo-EM reconstruction problem by frequency marching. 2017. SIAM J....") (current)
- 16:21, 7 September 2023 (diff | hist) . . (+84) . . Main Page (→3D Reconstruction)
- 12:17, 6 September 2023 (diff | hist) . . (+1,512) . . N 2023Seitz ESPER (Created page with "== Citation == Seitz, Evan / Acosta-Reyes, Francisco / Maji, Suvrajit / Schwander, Peter / Frank, Joachim. Recovery of conformational continuum from single-particle Cryo-EM i...") (current)
- 12:12, 6 September 2023 (diff | hist) . . (+131) . . Main Page (→3D Heterogeneity)
- 12:03, 6 September 2023 (diff | hist) . . (+1,670) . . N 2023Dsouza benchmark (Created page with "== Citation == Dsouza, Raison / Mashayekhi, Ghoncheh / Etemadpour, Roshanak / Schwander, Peter / Ourmazd, Abbas. Energy landscapes from cryo-EM snapshots: a benchmarking stud...") (current)
- 12:01, 6 September 2023 (diff | hist) . . (+108) . . Main Page (→3D Heterogeneity)
- 11:55, 6 September 2023 (diff | hist) . . (+1,698) . . N 2008Orzechowski Flexible (Created page with "== Citation == Orzechowski, Marek / Tama, Florence. Flexible fitting of high-resolution x-ray structures into cryoelectron microscopy maps using biased molecular dynamics sim...") (current)
- 11:51, 6 September 2023 (diff | hist) . . (+94) . . Main Page (→Fitting and docking)
- 12:15, 1 September 2023 (diff | hist) . . (+1,605) . . N 2023He EMReady (Created page with "== Citation == He, Jiahua / Li, Tao / Huang, Sheng-You. Improvement of cryo-EM maps by simultaneous local and non-local deep learning. 2023. Nature Communications, Vol. 14, N...") (current)
- 12:14, 1 September 2023 (diff | hist) . . (+101) . . Main Page (→Sharpening of high resolution information)
- 16:03, 31 August 2023 (diff | hist) . . (+866) . . N 2023Vilas FSO (Created page with "== Citation == Vilas, Jose-Luis / Tagare, Hemant D. New measures of anisotropy of cryo-EM maps. 2023. Nature Methods, 20, p. 1021-1024 == Abstract == We propose two new me...") (current)
- 16:02, 31 August 2023 (diff | hist) . . (+81) . . Main Page (→Resolution)
- 15:59, 31 August 2023 (diff | hist) . . (+1,598) . . N 2023Zhang REST (Created page with "== Citation == Zhang, Haonan / Li, Yan / Liu, Yanan / Li, Dongyu / Wang, Lin / Song, Kai / Bao, Keyan / Zhu, Ping. A method for restoring signals and revealing individual mac...") (current)
- 15:57, 31 August 2023 (diff | hist) . . (+81) . . Main Page (→Missing-wedge correction)
- 10:14, 30 August 2023 (diff | hist) . . (+1,417) . . N 2023Reggiano MEDIC (Created page with "== Citation == Reggiano, Gabriella / Lugmayr, Wolfgang / Farrell, Daniel / Marlovits, Thomas C. / DiMaio, Frank. Residue-level error detection in cryoelectron microscopy mode...") (current)
- 10:12, 30 August 2023 (diff | hist) . . (+80) . . Main Page (→Fitting and docking)
- 06:57, 29 August 2023 (diff | hist) . . (+1,529) . . N 2023Chang CryoFold (Created page with "== Citation == Chang, Liwei / Mondal, Arup / MacCallum, Justin L. / Perez, Alberto. CryoFold 2.0: Cryo-EM Structure Determination with MELD. 2023. The J. of Physical Chemistr...") (current)
- 06:57, 29 August 2023 (diff | hist) . . (+106) . . Main Page (→Fitting and docking)
- 06:45, 28 August 2023 (diff | hist) . . (+2,300) . . N 2023Matsumoto DEFmap (Created page with "== Citation == Matsumoto, Shigeyuki / Ishida, Shoichi / Terayama, Kei / Okuno, Yasuhshi. Quantitative analysis of protein dynamics using a deep learning technique combined wi...") (current)
- 06:44, 28 August 2023 (diff | hist) . . (0) . . Main Page (→3D Heterogeneity)
- 06:43, 28 August 2023 (diff | hist) . . (+114) . . Main Page (→3D Heterogeneity)
- 06:35, 28 August 2023 (diff | hist) . . (+1,521) . . N 2023Punjani 3DFlex (Created page with "== Citation == Punjani, Ali / Fleet, David J. 3DFlex: determining structure and motion of flexible proteins from cryo-EM. 2023. Nature Methods, Vol. 20, p. 860-870 == Abstr...") (current)
- 06:34, 28 August 2023 (diff | hist) . . (+80) . . Main Page (→3D Heterogeneity)
- 06:27, 28 August 2023 (diff | hist) . . (+2,343) . . N 2023Wang Autoencoder (Created page with "== Citation == Wang, Xiangwen / Lu, Yonggang / Lin, Xianghong / Li, Jianwei / Zhang, Zequn. An Unsupervised Classification Algorithm for Heterogeneous Cryo-EM Projection Imag...") (current)
- 06:26, 28 August 2023 (diff | hist) . . (+87) . . Main Page (→3D Heterogeneity)
- 06:50, 25 August 2023 (diff | hist) . . (+2,707) . . N 2023Bromberg Complex (Created page with "== Citation == Bromberg, Raquel / Guo, Yirui / Borek, Dominika / Otwinowski, Zbyszek. CryoEM single particle reconstruction with a complex-valued particle stack. 2023. J. Str...") (current)
- 06:49, 25 August 2023 (diff | hist) . . (+102) . . Main Page (→Image formation)
- 05:49, 25 August 2023 (diff | hist) . . (+2,170) . . N 2023Last Ice (Created page with "== Citation == Last, Mart G. F. / Voortman, Lenard M. / Sharp, Thomas H. Measuring cryo-TEM sample thickness using reflected light microscopy and machine learning. 2023. J. S...") (current)
- 05:47, 25 August 2023 (diff | hist) . . (+106) . . Main Page (→Automated data collection)
- 06:04, 24 August 2023 (diff | hist) . . (+1,209) . . N 2023Chen GMM (Created page with "== Citation == Chen, Muyuan / Toader, Bogdan / Lederman, Roy. Integrating molecular models into CryoEM heterogeneity analysis using scalable high-resolution deep Gaussian mix...") (current)
- 06:03, 24 August 2023 (diff | hist) . . (+98) . . Main Page (→3D Heterogeneity)
- 05:52, 24 August 2023 (diff | hist) . . (+1,886) . . N 2023Herreros ZART (Created page with "== Citation == Herreros, D. / Kiska, J. / Ram\irez-Aportela, E. / Filipovic, J. / Carazo, J. M. / Sorzano, C. O. S. ZART: A Novel Multiresolution Reconstruction Algorithm wit...") (current)
- 05:51, 24 August 2023 (diff | hist) . . (+107) . . Main Page (→3D Reconstruction)
- 05:46, 24 August 2023 (diff | hist) . . (+1,570) . . N 2023Kim Review (Created page with "== Citation == Kim, Hannah Hyun-Sook / Uddin, Mostofa Rafid / Xu, Min / Chang, Yi-Wei. Computational methods toward unbiased pattern mining and structure determination in cry...") (current)
- 05:44, 24 August 2023 (diff | hist) . . (+87) . . Main Page (→Books and reviews)
- 17:05, 23 August 2023 (diff | hist) . . (+1,202) . . N 2023Toader Heterogeneity (Created page with "== Citation == Toader, Bogdan / Sigworth, Fred J. / Lederman, Roy R. Methods for Cryo-EM single particle reconstruction of macromolecules having continuous heterogeneity. 202...") (current)
- 17:04, 23 August 2023 (diff | hist) . . (+80) . . Main Page (→Books and reviews)
- 16:45, 23 August 2023 (diff | hist) . . (+1,656) . . N 2023Si DeNovo (Created page with "== Citation == Si, Dong / Chen, Jason / Nakamura, Andrew / Chang, Luca / Guan, Haowen. Smart de novo Macromolecular Structure Modeling from Cryo-EM Maps. 2023. J. Molecular B...") (current)
- 16:45, 23 August 2023 (diff | hist) . . (+73) . . Main Page (→Books and reviews)
- 09:58, 22 August 2023 (diff | hist) . . (+1,865) . . N 2023Liu AirWater (Created page with "== Citation == Liu, Nan / Wang, Hong-Wei. Better Cryo-EM Specimen Preparation: How to Deal with the Air--Water Interface? 2023. J. Molecular Biology, Vol. 435, No. 9, p. 1679...") (current)
- 09:57, 22 August 2023 (diff | hist) . . (+114) . . Main Page (→Sample preparation)
- 09:37, 22 August 2023 (diff | hist) . . (+1,420) . . N 2023Seitz Geometric (Created page with "== Citation == Seitz, Evan / Frank, Joachim / Schwander, Peter. Beyond ManifoldEM: geometric relationships between manifold embeddings of a continuum of 3D molecular structur...") (current)
- 09:36, 22 August 2023 (diff | hist) . . (+160) . . Main Page (→3D Heterogeneity)
- 07:55, 14 August 2023 (diff | hist) . . (+1,297) . . N 2023Zeng AITOM (Created page with "== Citation == Zeng, Xiangrui / Kahng, Anson / Xue, Liang / Mahamid, Julia / Chang, Yi-Wei / Xu, Min. High-throughput cryo-ET structural pattern mining by unsupervised deep i...") (current)
- 07:54, 14 August 2023 (diff | hist) . . (+116) . . Main Page (→Segmentation)
- 06:50, 14 August 2023 (diff | hist) . . (+1,187) . . N 2023Millan LL (Created page with "== Citation == Millán, Claudia / McCoy, Airlie J. / Terwilliger, Thomas C. / Read, Randy J. Likelihood-based docking of models into cryo-EM maps. 2023. Acta Crystallographic...") (current)
- 06:49, 14 August 2023 (diff | hist) . . (+89) . . Main Page (→Fitting and docking)
- 06:45, 14 August 2023 (diff | hist) . . (+1,451) . . N 2023Read LL (Created page with "== Citation == Read, Randy J. / Millán, Claudia / McCoy, Airlie J. / Terwilliger, Thomas C. Likelihood-based signal and noise analysis for docking of models into cryo-EM map...") (current)
- 06:44, 14 August 2023 (diff | hist) . . (+116) . . Main Page (→Fitting and docking)
- 07:07, 11 August 2023 (diff | hist) . . (+1,700) . . N 2023Dai CryoRes (Created page with "== Citation == Dai, M. / Dong, Z. / Xu, K. / Zhang, Q. C. CryoRes: Local Resolution Estimation ofCryo-EM Density Maps by Deep Learning. 2023. J. Molecular Biology, Vol. 435,...") (current)
- 07:05, 11 August 2023 (diff | hist) . . (+76) . . Main Page (→Resolution)
- 07:08, 10 August 2023 (diff | hist) . . (+1,847) . . N 2023Neselu IceThickness (Created page with "== Citation == Neselu, Kasahun / Wang, Bing / Rice, William J. / Potter, Clinton S. / Carragher, Bridget / Chua, Eugene Y. D. Measuring the effects of ice thickness on resolu...") (current)
- 07:07, 10 August 2023 (diff | hist) . . (+82) . . Main Page (→Sample preparation)
- 06:58, 10 August 2023 (diff | hist) . . (+1,555) . . N 2023Chen Joint (Created page with "== Citation == Chen, Yu-Xuan / Feng, Dagan / Shen, Hong-Bin. Cryo-EM image alignment: From pair-wise to joint with deep unsupervised difference learning. 2023. J. Structural...") (current)
- 06:58, 10 August 2023 (diff | hist) . . (+116) . . Main Page (→2D Classification and clustering)
- 06:34, 10 August 2023 (diff | hist) . . (+2,204) . . N 2023Huang ZSSR (Created page with "== Citation == Huang, Qinwen / Zhou, Ye / Liu, Hsuan-Fu / Bartesaghi, Alberto. Multiple-image super-resolution of cryo-electron micrographs based on deep internal learning. 2...") (current)
- 06:32, 10 August 2023 (diff | hist) . . (+99) . . Main Page (→2D Preprocessing)
- 06:55, 8 August 2023 (diff | hist) . . (+1,983) . . N 2023Kinman Analysis (Created page with "== Citation == Kinman, Laurel F. / Powell, Barrett M. / Zhong, Ellen D. / Berger, Bonnie / Davis, Joseph H. Uncovering structural ensembles from single-particle cryo-EM data...") (current)
- 06:55, 8 August 2023 (diff | hist) . . (+102) . . Main Page (→3D Heterogeneity)
- 06:28, 7 August 2023 (diff | hist) . . (+1,492) . . N 2023Amann TimeResolved (Created page with "== Citation == Amann, Sascha Josef / Keihsler, Demian / Bodrug, Tatyana / Brown, Nicholas G. / Haselbach, David. Frozen in time: analyzing molecular dynamics with time-resolv...") (current)
- 06:27, 7 August 2023 (diff | hist) . . (+74) . . Main Page (→Books and reviews)
- 06:22, 7 August 2023 (diff | hist) . . (+2,375) . . N 2022Burley PDB (Created page with "== Citation == Burley, Stephen K. / Berman, Helen M. / Chiu, Wah / Dai, Wei / Flatt, Justin W. / Hudson, Brian P. / Kaelber, Jason T. / Khare, Sagar D. / Kulczyk, Arkadiusz W...") (current)
- 06:21, 7 August 2023 (diff | hist) . . (+78) . . Main Page (→Books and reviews)
- 06:11, 7 August 2023 (diff | hist) . . (+2,034) . . N 2023Kim Ptolemy (Created page with "== Citation == Kim, Paul T. / Noble, Alex J. / Cheng, Anchi / Bepler, Tristan. Learning to automate cryo-electron microscopy data collection with Ptolemy. 2023. IUCrJ, Vol. 1...") (current)
- 06:10, 7 August 2023 (diff | hist) . . (+72) . . Main Page (→Automated data collection)
- 13:35, 26 July 2023 (diff | hist) . . (+2,711) . . N 2023Cheng Leginon (Created page with "== Citation == Cheng, Anchi / Kim, Paul T. / Kuang, Huihui / Mendez, Joshua H. / Chua, Eugene Y. D. / Maruthi, Kashyap / Wei, Hui / Sawh, Anjelique / Aragon, Mahira F. / Serb...") (current)
- 13:34, 26 July 2023 (diff | hist) . . (+74) . . Main Page (→Automated data collection)
- 10:14, 25 July 2023 (diff | hist) . . (+1,852) . . N 2023Liu AWI (Created page with "== Citation == Liu, Nan / Wang, Hong-Wei. Better Cryo-EM Specimen Preparation: How to Deal with the Air--Water Interface? 2023, J. Molecular Biology, Vol. 435, No. 9, p. 1679...") (current)
- 10:13, 25 July 2023 (diff | hist) . . (+66) . . Main Page (→Books and reviews)
- 09:58, 25 July 2023 (diff | hist) . . (+1,558) . . N 2023Schreiber charge (Created page with "== Citation == Schreiber, Makoto Tokoro / Maigné, Alan / Beleggia, Marco / Shibata, Satoshi / Wolf, Matthias. Temporal dynamics of charge buildup in cryo-electron microscopy...") (current)
- 09:53, 25 July 2023 (diff | hist) . . (+74) . . Main Page (→Image formation)
- 09:11, 25 July 2023 (diff | hist) . . (+1,482) . . N 2023Seifer RevisedSaxton (Created page with "== Citation == Seifer, Shahar. Sampling theory perspective on tomographic tilt increment schemes. 2023. Ultramicroscopy, Vol. 245, p. 113669 == Abstract == Given a limited...") (current)
- 09:10, 25 July 2023 (diff | hist) . . (+98) . . Main Page (→Collection geometry)
- 07:59, 25 July 2023 (diff | hist) . . (+2,104) . . N 2022Zhang DRVAE (Created page with "== Citation == Zhang, Dongxu / Yan, Yang / Huang, Yulin / Liu, Bowen / Zheng, Qingbing / Zhang, Jun / Xia, Ningshao. Unsupervised Cryo-EM Images Denoising and Clustering base...") (current)
- 07:58, 25 July 2023 (diff | hist) . . (+88) . . Main Page (→2D Classification and clustering)
- 09:08, 24 July 2023 (diff | hist) . . (+1,710) . . N 2023Terashi DAQrefine (Created page with "== Citation == Terashi, Genki / Wang, Xiao / Kihara, Daisuke. Protein model refinement for cryo-EM maps using AlphaFold2 and the DAQ score. 2023. Acta Crystallographica Secti...") (current)
- 09:07, 24 July 2023 (diff | hist) . . (+92) . . Main Page (→Fitting and docking)
- 08:42, 24 July 2023 (diff | hist) . . (+1,526) . . N 2023Zheng Ultraflat (Created page with "== Citation == Zheng, Liming / Liu, Nan / Gao, Xiaoyin / Zhu, Wenqing / Liu, Kun / Wu, Cang / Yan, Rui / Zhang, Jincan / Gao, Xin / Yao, Yating / others. Uniform thin ice on...") (current)
- 08:41, 24 July 2023 (diff | hist) . . (+85) . . Main Page (→Sample preparation)
- 07:57, 20 July 2023 (diff | hist) . . (+1,472) . . N 2022Bouvette SmartScope (Created page with "== Citation == Bouvette, Jonathan / Huang, Qinwen / Riccio, Amanda A. / Copeland, William C. / Bartesaghi, Alberto / Borgnia, Mario J. Automated systematic evaluation of cryo...") (current)
- 07:55, 20 July 2023 (diff | hist) . . (+56) . . Main Page (→Automated data collection)
- 06:56, 19 July 2023 (diff | hist) . . (+1,653) . . N 2023Tang Reweighting (Created page with "== Citation == Tang, Wai Shing / Silva-Sánchez, David / Giraldo-Barreto, Julian / Carpenter, Bob / Hanson, Sonya M. / Barnett, Alex H. / Thiede, Erik H. / Cossio, Pilar. Ens...") (current)
- 06:54, 19 July 2023 (diff | hist) . . (+87) . . Main Page (→3D Heterogeneity)
- 06:44, 19 July 2023 (diff | hist) . . (+1,422) . . N 2023Sharon Enhancement (Created page with "== Citation == Sharon, Guy / Shkolnisky, Yoel / Bendory, Tamir. Signal enhancement for two-dimensional cryo-EM data processing. 2023. Biological Imaging, Vol. 3, p. e7 == A...") (current)
- 06:43, 19 July 2023 (diff | hist) . . (+81) . . Main Page (→2D Preprocessing)
- 06:29, 19 July 2023 (diff | hist) . . (+1,430) . . N 2022Wang Thunder (Created page with "== Citation == Wang, Zhao / Ruan, Huabin / Yang, Guangwen / Li, Xueming. Parallelizing the cryo-EM structure determination in THUNDER using GPU cluster. 2022. Engineering Rep...") (current)
- 06:28, 19 July 2023 (diff | hist) . . (+79) . . Main Page (→3D Alignment)
- 07:13, 18 July 2023 (diff | hist) . . (+1,220) . . N 2022Guaita Review (Created page with "== Citation == Guaita, Margherita / Watters, Scott C. / Loerch, Sarah. Recent advances and current trends in cryo-electron microscopy. 2022. Current opinion in structural bio...") (current)
- 07:12, 18 July 2023 (diff | hist) . . (+101) . . Main Page (→Books and reviews)
- 07:08, 18 July 2023 (diff | hist) . . (+1,211) . . N 2022Metskas STA (Created page with "== Citation == Metskas, Lauren Ann / Wilfong, Rosalie / Jensen, Grant J. Subtomogram averaging for biophysical analysis and supramolecular context. 2022. J. Structural Biolog...") (current)
- 07:06, 18 July 2023 (diff | hist) . . (+78) . . Main Page (→Subtomogram analysis)
- 14:09, 4 July 2023 (diff | hist) . . (-1) . . Main Page (→Image alignment)
- 14:05, 4 July 2023 (diff | hist) . . (+1,622) . . N 2022Zheng Aretomo (Created page with "== Citation == Zheng, Shawn / Wolff, Georg / Greenan, Garrett / Chen, Zhen / Faas, Frank G. A. / Bárcena, Montserrat / Koster, Abraham J. / Cheng, Yifan / Agard, David A. Ar...") (current)
- 14:04, 4 July 2023 (diff | hist) . . (+89) . . Main Page (→Image alignment)
- 13:55, 4 July 2023 (diff | hist) . . (+1,476) . . N 2022Liedtke Review (Created page with "== Citation == Liedtke, Janine / Depelteau, Jamie S. / Briegel, Ariane. How advances in cryo-electron tomography have contributed to our current view of bacterial cell biolog...") (current)
- 13:54, 4 July 2023 (diff | hist) . . (+96) . . Main Page (→Books and reviews)
- 13:49, 4 July 2023 (diff | hist) . . (+1,336) . . N 2022Donnat GAN (Created page with "== Citation == Donnat, Claire / Levy, Axel / Poitevin, Frederic / Zhong, Ellen D. / Miolane, Nina. Deep generative modeling for volume reconstruction in cryo-electron microsc...") (current)
- 13:48, 4 July 2023 (diff | hist) . . (+87) . . Main Page (→Books and reviews)
- 09:02, 28 June 2023 (diff | hist) . . (+3,038) . . N 2022Urzhumtsev Direct (Created page with "== Citation == Urzhumtsev, Alexandre G. / Urzhumtseva, Ludmila M. / Lunin, Vladimir Y. Direct calculation of cryo-EM and crystallographic model maps for real-space refinement...") (current)
- 09:00, 28 June 2023 (diff | hist) . . (+90) . . Main Page (→Fitting and docking)
- 08:35, 28 June 2023 (diff | hist) . . (+1,855) . . N 2022Beton Fitting (Created page with "== Citation == Beton, Joseph George / Cragnolini, Tristan / Kaleel, Manaz / Mulvaney, Thomas / Sweeney, Aaron / Topf, Maya. Integrating model simulation tools and cryo-electr...") (current)
- 08:34, 28 June 2023 (diff | hist) . . (+63) . . Main Page (→Books and reviews)
- 07:37, 28 June 2023 (diff | hist) . . (+1,690) . . N 2023Heymann Ewald (Created page with "== Citation == Heymann, J. Bernard. The Ewald sphere/focus gradient does not limit the resolution of cryoEM reconstructions. 2023. J. Structural Biology: X, Vol. 7, p. 100083...") (current)
- 07:36, 28 June 2023 (diff | hist) . . (+127) . . Main Page (→Image formation)
- 07:17, 28 June 2023 (diff | hist) . . (+1,783) . . N 2022Sorzano Validation (Created page with "== Citation == Sorzano, C. O. S. / Vilas, J. L. / Ram\irez-Aportela, Erney / Krieger, J. / Del Hoyo, D. / de Isidro-Gómez, F. / Herreros, David / Fernandez-Giménez, Estrell...") (current)
- 07:08, 28 June 2023 (diff | hist) . . (+81) . . Main Page (→Validation)
- 09:10, 26 June 2023 (diff | hist) . . (+1,649) . . N 2022Liu Isonet (Created page with "== Citation == Liu, Yun-Tao / Zhang, Heng / Wang, Hui / Tao, Chang-Lu / Bi, Guo-Qiang / Zhou, Z. Hong. Isotropic reconstruction for electron tomography with deep learning. 20...") (current)
- 09:10, 26 June 2023 (diff | hist) . . (+82) . . Main Page (→Noise reduction)
- 08:47, 26 June 2023 (diff | hist) . . (+1,240) . . N 2022Urzhumtsev XrayEM (Created page with "== Citation == Urzhumtsev, Alexandre / Lunin, Vladimir Y. Analytic modeling of inhomogeneous-resolution maps in cryo-electron microscopy and crystallography. 2022. IUCrJ, Vol...") (current)
- 08:32, 26 June 2023 (diff | hist) . . (+97) . . Main Page (→Fitting and docking)
- 13:06, 23 June 2023 (diff | hist) . . (+1,065) . . N 2022Bepler Smart (Created page with "== Citation == Bepler, Tristan / Borst, Andrew J. / Bouvette, Jonathan / Cannone, Giuseppe / Chen, Songye / Cheng, Anchi / Cheng, Ao / Fan, Quanfu / Grollios, Fanis / Gupta,...") (current)
- 13:02, 23 June 2023 (diff | hist) . . (+60) . . Main Page (→Automated data collection)
- 09:34, 23 June 2023 (diff | hist) . . (+1,454) . . N 2023Marshall PCA (Created page with "== Citation == Marshall, Nicholas F. / Mickelin, Oscar / Shi, Yunpeng / Singer, Amit. Fast principal component analysis for cryo-electron microscopy images. 2023. Biological...") (current)
- 09:34, 23 June 2023 (diff | hist) . . (+73) . . Main Page (→2D Preprocessing)
- 08:44, 23 June 2023 (diff | hist) . . (+1,736) . . N 2022Garcia DeepHand (Created page with "== Citation == Garcia Condado, J. / Muñoz-Barrutia, A. / Sorzano, C. O. S. Automatic determination of the handedness of Single-Particle maps of macromolecules solved by Cryo...") (current)
- 08:35, 23 June 2023 (diff | hist) . . (+95) . . Main Page (→Validation)
- 08:15, 23 June 2023 (diff | hist) . . (+1,367) . . N 2022Havelkova regularization (Created page with "== Citation == Havelková, Eva / Hnětynková, Iveta. Iterative hybrid regularization for extremely noisy full models in single particle analysis. 2023. Linear Algebra and it...") (current)
- 08:13, 23 June 2023 (diff | hist) . . (+104) . . Main Page (→3D Reconstruction)
- 09:21, 16 June 2023 (diff | hist) . . (+1,686) . . N 2022Levy CryoFire (Created page with "== Citation == Levy, Axel / Wetzstein, Gordon / Martel, Julien N. P. / Poitevin, Frederic / Zhong, Ellen Amortized Inference for Heterogeneous Reconstruction in Cryo-EM 202...") (current)
- 09:21, 16 June 2023 (diff | hist) . . (+110) . . Main Page (→3D Heterogeneity)
- 05:59, 15 June 2023 (diff | hist) . . (+1,703) . . N 2023Bendory Autocorrelation (Created page with "== Citation == Bendory, Tamir / Khoo, Yuehaw / Kileel, Joe / Mickelin, Oscar / Singer, Amit. Autocorrelation analysis for cryo-EM with sparsity constraints: Improved sample c...") (current)
- 05:55, 15 June 2023 (diff | hist) . . (+123) . . Main Page (→3D Reconstruction)
- 05:43, 15 June 2023 (diff | hist) . . (+1,814) . . N 2022Hohle Ice (Created page with "== Citation == Hohle, Markus Matthias / Lammens, Katja / Gut, Fabian / Wang, Bingzhi / Kahler, Sophia / Kugler, Kathrin / Till, Michael / Beckmann, Roland / Hopfner, Karl-Pet...") (current)
- 05:42, 15 June 2023 (diff | hist) . . (+83) . . Main Page (→Automated data collection)
- 05:36, 15 June 2023 (diff | hist) . . (+1,674) . . N 2023Esteve Spectral (Created page with "== Citation == Esteve-Yagüe, Carlos / Diepeveen, Willem / Öktem, Ozan / Schönlieb, Carola-Bibiane Spectral decomposition of atomic structures in heterogeneous cryo-EM. 2...") (current)
- 05:35, 15 June 2023 (diff | hist) . . (+134) . . Main Page (→3D Heterogeneity)
- 08:44, 14 June 2023 (diff | hist) . . (+2,024) . . N 2022Wu Manifold (Created page with "== Citation == Wu, Zhaolong / Chen, Enbo / Zhang, Shuwen / Ma, Yinping / Mao, Youdong Visualizing conformational space of functional biomolecular complexes by deep manifold...") (current)
- 08:42, 14 June 2023 (diff | hist) . . (+88) . . Main Page (→3D Heterogeneity)
- 07:58, 14 June 2023 (diff | hist) . . (+1,541) . . N 2022Eldar ASOCEM (Created page with "== Citation == Eldar, Amitay / Amos, Ido / Shkolnisky, Yoel ASOCEM: Automatic Segmentation Of Contaminations in cryo-EM 2022. Journal of Structural Biology, Vol. 214, No. 3...") (current)
- 07:57, 14 June 2023 (diff | hist) . . (+79) . . Main Page (→Automatic particle picking)
- 06:44, 12 June 2023 (diff | hist) . . (+3,003) . . N 2022Jimenez ScipionTomo (Created page with "== Citation == Jiménez de la Morena, J. / Conesa, P. / Fonseca, Y. C. / de Isidro-Gómez, F. P. / Herreros, D. / Fernández-Giménez, E. / Strelak, D. / Moebel, E. / Buchhol...") (current)
- 06:43, 12 June 2023 (diff | hist) . . (+81) . . Main Page (→Software)
- 06:40, 12 June 2023 (diff | hist) . . (+1,748) . . N 2022Fluty Precision (Created page with "== Citation == Fluty, Adam C. / Ludtke, Steven J. Precision requirements and data compression in CryoEM/CryoET. 2022. Journal of Structural Biology, Vol. 214, No. 3, p. 10787...") (current)
- 06:40, 12 June 2023 (diff | hist) . . (+85) . . Main Page (→Software)
- 06:36, 12 June 2023 (diff | hist) . . (+1,438) . . N 2022Russo Review (Created page with "== Citation == Russo, Christopher J. / Dickerson, Joshua L. / Naydenova, Katerina Cryomicroscopy in situ: what is the smallest molecule that can be directly identified witho...") (current)
- 06:35, 12 June 2023 (diff | hist) . . (+73) . . Main Page (→Sample preparation)
- 18:33, 7 June 2023 (diff | hist) . . (+1,515) . . N 2022Terashi DAQ (Created page with "== Citation == Terashi, Genki / Wang, Xiao / Maddhuri Venkata Subramaniya, Sai Raghavendra / Tesmer, John J. G. / Kihara, Daisuke Residue-wise local quality estimation for p...") (current)
- 18:32, 7 June 2023 (diff | hist) . . (+82) . . Main Page (→Validation)
- 08:33, 24 January 2023 (diff | hist) . . (+1,538) . . N 2022He EMBuild (Created page with "== Citation == He, Jiahua / Lin, Peicong / Chen, Ji / Cao, Hong / Huang, Sheng-You. Model building of protein complexes from intermediate-resolution cryo-EM maps with deep le...") (current)
- 08:32, 24 January 2023 (diff | hist) . . (+80) . . Main Page (→Fitting and docking)
- 08:23, 24 January 2023 (diff | hist) . . (+2,054) . . N 2022Kulik TAAM (Created page with "== Citation == Kulik, Marta / Chodkiewicz, Michał Leszek / Dominiak, Paulina Maria. Theoretical 3D electron diffraction electrostatic potential maps of proteins modeled with...") (current)
- 08:22, 24 January 2023 (diff | hist) . . (+113) . . Main Page (→Image formation)
- 08:34, 23 January 2023 (diff | hist) . . (+1,701) . . N 2022Moebel unsupervised (Created page with "== Citation == Moebel, E. / Kervrann, C. Towards unsupervised classification of macromolecular complexes in cryo electron tomography: Challenges and opportunities, 2022, Com...") (current)
- 08:33, 23 January 2023 (diff | hist) . . (+110) . . Main Page (→Subtomogram analysis)
- 08:26, 23 January 2023 (diff | hist) . . (+2,757) . . N 2022Lamm MemBrain (Created page with "== Citation == Lamm, L. / Righetto, R. D. / Wietrzynski, W. / Pöge, M. / Martinez-Sanchez, A. / Peng, T. / Engel, B. MemBrain: A deep learning-aided pipeline for detection o...") (current)
- 08:24, 23 January 2023 (diff | hist) . . (+81) . . Main Page (→Segmentation)
- 07:58, 20 January 2023 (diff | hist) . . (+2,647) . . N 2022Hao Picking (Created page with "== Citation == Hao, Yu / Wan, Xiaohua / Yan, Rui / Liu, Zhiyong / Li, Jintao / Zhang, Shihua / Cui, Xuefeng / Zhang, Fa. VP-Detector: A 3D multi-scale dense convolutional neu...") (current)
- 07:57, 20 January 2023 (diff | hist) . . (+72) . . Main Page (→Subtomogram analysis)
- 09:56, 16 January 2023 (diff | hist) . . (+2,208) . . N 2022Martinez PyOrg (Created page with "== Citation == Martinez-Sanchez, Antonio / Baumeister, Wolfgang / Lučić, Vladan. Statistical spatial analysis for cryo-electron tomography, 2022, Computer Methods and Progr...") (current)
- 09:55, 16 January 2023 (diff | hist) . . (+92) . . Main Page (→Software)
- 09:49, 16 January 2023 (diff | hist) . . (+2,165) . . N 2022Shi Denoising (Created page with "== Citation == Shi, Y. / Singer, A. Ab-initio contrast estimation and denoising of cryo-EM images. 2022, Computer Methods and Programs in Biomedicine, Vol. 224: p. 107018 =...") (current)
- 09:02, 16 January 2023 (diff | hist) . . (+79) . . Main Page (→2D Preprocessing)
- 09:03, 10 January 2023 (diff | hist) . . (+1,800) . . N 2022Gilles Wilson (Created page with "== Citation == Gilles, Marc Aurèle / Singer, Amit. A molecular prior distribution for Bayesian inference based on Wilson statistics. 2022. Computer Methods and Programs in B...") (current)
- 09:02, 10 January 2023 (diff | hist) . . (+120) . . Main Page (→Sharpening of high resolution information)
- 08:48, 10 January 2023 (diff | hist) . . (+2,641) . . N 2022Heymann PSSNR (Created page with "== Citation == Heymann, J. Bernard. The progressive spectral signal-to-noise ratio of cryo-electron micrograph movies as a tool to assess quality and radiation damage. 2022,...") (current)
- 08:39, 10 January 2023 (diff | hist) . . (+121) . . Main Page (→Image formation)
- 07:51, 14 December 2022 (diff | hist) . . (+2,476) . . N 2022Westbrook mmCIF (Created page with "== Citation == Westbrook, John D. / Young, Jasmine Y. / Shao, Chenghua / Feng, Zukang / Guranovic, Vladimir / Lawson, Catherine L. / Vallat, Brinda / Adams, Paul D. / Berrisf...") (current)
- 07:48, 14 December 2022 (diff | hist) . . (+62) . . Main Page (→Databases)
- 07:17, 12 December 2022 (diff | hist) . . (-90) . . Main Page (→Sample preparation)
- 07:11, 12 December 2022 (diff | hist) . . (+90) . . Main Page (→Sample preparation)
- 06:54, 2 December 2022 (diff | hist) . . (+4) . . Main Page (→Online courses and Learning material)
- 06:52, 2 December 2022 (diff | hist) . . (+54) . . Main Page (→Online courses and Learning material)
- 08:23, 23 November 2022 (diff | hist) . . (+1,372) . . N 2022Hryc Pathwalking (Created page with "== Citation == Hryc, Corey F. / Baker, Matthew L. Beyond the Backbone: The Next Generation of Pathwalking Utilities for Model Building in CryoEM Density Maps. 2022, Biomolecu...") (current)
- 08:22, 23 November 2022 (diff | hist) . . (+75) . . Main Page (→Fitting and docking)
- 08:11, 23 November 2022 (diff | hist) . . (+1,418) . . N 2022Hagen Screening (Created page with "== Citation == Hagen, Wim J. H. Light ‘Em up: Efficient Screening of Gold Foil Grids in Cryo-EM. 2022, Frontiers in Molecular Biosciences, Vol. 9, p. 912363 == Abstract ==...") (current)
- 08:10, 23 November 2022 (diff | hist) . . (+110) . . Main Page (→Automated data collection)
- 07:51, 23 November 2022 (diff | hist) . . (+1,748) . . N 2022Flutty bits (Created page with "== Citation == Fluty, Adam C. / Ludtke, Steven J. Precision requirements and data compression in CryoEM/CryoET. 2022, Journal of Structural Biology, Vol. 214, No. 3, p. 10787...") (current)
- 07:50, 23 November 2022 (diff | hist) . . (+66) . . Main Page (→Automated data collection)
- 07:24, 21 November 2022 (diff | hist) . . (+1,919) . . N 2022Liu Review (Created page with "== Citation == Liu, H.-F. / Zhou, Ye / Bartesaghi, Alberto. High-resolution structure determination using high-throughput electron cryo-tomography, 2022, Acta Crystallographi...") (current)
- 07:18, 21 November 2022 (diff | hist) . . (+89) . . Main Page (→Books and reviews)
- 14:55, 9 June 2022 (diff | hist) . . (+2,127) . . N 2022Sorzano 1000 (Created page with "== Citation == Sorzano, C. O. S. / Carazo, J. M. Cryo-Electron Microscopy: The field of 1,000^+ methods. 2022. Journal of structural biology, Vol. 214, p. 107861 == Abstract...") (current)
- 14:53, 9 June 2022 (diff | hist) . . (+74) . . Main Page (→Books and reviews)
- 14:49, 9 June 2022 (diff | hist) . . (+2,364) . . N 2022DiIorio Multiple (Created page with "== Citation == DiIorio, Megan C. / Kulczyk, Arkadiusz W. A Robust Single-Particle Cryo-Electron Microscopy (cryo-EM) Processing Workflow with cryoSPARC, RELION, and Scipion....") (current)
- 14:47, 9 June 2022 (diff | hist) . . (+159) . . Main Page (→Software)
- 14:43, 9 June 2022 (diff | hist) . . (+1,342) . . N 2022Waarshamanage EMDA (Created page with "== Citation == Warshamanage, Rangana / Yamashita, Keitaro / Murshudov, Garib N. EMDA: A Python package for Electron Microscopy Data Analysis. 2022. Journal of structural biol...") (current)
- 14:42, 9 June 2022 (diff | hist) . . (+89) . . Main Page (→Validation)
- 14:39, 9 June 2022 (diff | hist) . . (-2) . . 2022Frangakis Curvature (→Abstract) (current)
- 14:38, 9 June 2022 (diff | hist) . . (+1,510) . . N 2022Frangakis Curvature (Created page with "== Citation == Frangakis, Achilleas S. Mean curvature motion facilitates the segmentation and surface visualization of electron tomograms. 2022. Journal of structural biology...")
- 14:37, 9 June 2022 (diff | hist) . . (+115) . . Main Page (→Segmentation)
- 14:33, 9 June 2022 (diff | hist) . . (+1,894) . . N 2022Levitz Chameleon (Created page with "== Citation == Levitz, Talya S. / Brignole, Edward J. / Fong, Ivan / Darrow, Michele C. / Drennan, Catherine L. Effects of chameleon dispense-to-plunge speed on particle conc...") (current)
- 14:31, 9 June 2022 (diff | hist) . . (+144) . . Main Page (→Sample preparation)
- 14:27, 9 June 2022 (diff | hist) . . (+1,454) . . N 2022Zhu ElectronCounting (Created page with "== Citation == Zhu, Dongjie / Shi, Huigang / Wu, Chunling / Zhang, Xinzheng. An electron counting algorithm improves imaging of proteins with low-acceleration-voltage cryo-el...") (current)
- 14:25, 9 June 2022 (diff | hist) . . (+100) . . Main Page (→Automated data collection)
- 14:18, 9 June 2022 (diff | hist) . . (+1,646) . . N 2022Zhang EPicker (Created page with "== Citation == Zhang, Xinyu / Zhao, Tianfang / Chen, Jiansheng / Shen, Yuan / Li, Xueming. EPicker is an exemplar-based continual learning approach for knowledge accumulation...") (current)
- 14:17, 9 June 2022 (diff | hist) . . (+84) . . Main Page (→Automatic particle picking)
- 14:14, 9 June 2022 (diff | hist) . . (+2,641) . . N 2022Heymann ProgressiveSSNR (Created page with "== Citation == Heymann, J. Bernard. The progressive spectral signal-to-noise ratio of cryo-electron micrograph movies as a tool to assess quality and radiation damage. 2022....") (current)
- 14:12, 9 June 2022 (diff | hist) . . (+105) . . Main Page (→2D Preprocessing)
- 14:04, 9 June 2022 (diff | hist) . . (+2,591) . . N 2022Wang EMDB (Created page with "== Citation == Wang, Zhe / Patwardhan, Ardan / Kleywegt, Gerard J. Validation analysis of EMDB entries. 2022. Acta crystallographica. Section D, Structural biology, Vol. 78,...") (current)
- 14:01, 9 June 2022 (diff | hist) . . (+71) . . Main Page (→Databases)
- 13:55, 9 June 2022 (diff | hist) . . (+1,522) . . N 2022Dickerson Inelastic (Created page with "== Citation == Dickerson, Joshua L. / Lu, Peng-Han / Hristov, Dilyan / Dunin-Borkowski, Rafal E. / Russo, Christopher J. Imaging biological macromolecules in thick specimens:...") (current)
- 13:54, 9 June 2022 (diff | hist) . . (+97) . . Main Page (→Image formation)
- 13:50, 9 June 2022 (diff | hist) . . (+1,695) . . N 2022Peck Montage (Created page with "== Citation == Peck, Ariana / Carter, Stephen D. / Mai, Huanghao / Chen, Songye / Burt, Alister / Jensen, Grant J. Montage electron tomography of vitrified specimens. 2022. J...") (current)
- 13:48, 9 June 2022 (diff | hist) . . (+66) . . Main Page (→Automated data collection)
- 13:43, 9 June 2022 (diff | hist) . . (+2,196) . . N 2022Zhou Data (Created page with "== Citation == Zhou, Ye / Moscovich, Amit / Bartesaghi, Alberto. Data-driven determination of number of discrete conformations in single-particle cryo-EM. 2022. Computer Meth...") (current)
- 13:41, 9 June 2022 (diff | hist) . . (+86) . . Main Page (→3D Heterogeneity)
- 13:27, 9 June 2022 (diff | hist) . . (+2,143) . . N 2022Wang Spectral (Created page with "== Citation == Wang, Xiangwen / Lu, Yonggang / Lin, Xianghong. Heterogeneous cryo-EM projection image classification using a two-stage spectral clustering based on novel dist...") (current)
- 13:25, 9 June 2022 (diff | hist) . . (+82) . . Main Page (→2D Classification and clustering)
- 12:24, 3 May 2022 (diff | hist) . . (+2,445) . . N 2022Behkamal LPTD (Created page with "== Citation == Behkamal, Bahareh / Naghibzadeh, Mahmoud / Pagnani, Andrea / Saberi, Mohammad Reza / Al Nasr, Kamal. LPTD: A Novel Linear Programming-based Topology Determinat...") (current)
- 12:22, 3 May 2022 (diff | hist) . . (+84) . . Main Page (→Fitting and docking)
- 12:18, 3 May 2022 (diff | hist) . . (+2,205) . . N 2020Yokoyama Good (Created page with "== Citation == Yokoyama, Yuichi / Terada, Tohru / Shimizu, Kentaro / Nishikawa, Kouki / Kozai, Daisuke / Shimada, Atsuhiro / Mizoguchi, Akira / Fujiyoshi, Yoshinori / Tani, K...") (current)
- 12:16, 3 May 2022 (diff | hist) . . (+93) . . Main Page (→Automated data collection)
- 12:12, 3 May 2022 (diff | hist) . . (+1,654) . . N 2022Lu SphericalEmbeddings (Created page with "== Citation == Lu, Yonggang / Liu, Jiaxuan / Zhu, Li / Zhang, Bianlan / He, Jing. 3D reconstruction from cryo-EM projection images using two spherical embeddings. 2022. Commu...") (current)
- 12:11, 3 May 2022 (diff | hist) . . (+113) . . Main Page (→3D Alignment)
- 12:04, 3 May 2022 (diff | hist) . . (+2,263) . . N 2022Peters Feature (Created page with "== Citation == Peters, John Jacob / Leitz, Jeremy / Guo, Qiang / Beck, Florian / Baumeister, Wolfgang / Brunger, Axel T. A feature-guided, focused 3D signal permutation metho...") (current)
- 12:03, 3 May 2022 (diff | hist) . . (+93) . . Main Page (→Subtomogram analysis)
- 11:56, 3 May 2022 (diff | hist) . . (+1,474) . . N 2022Neijenhuis Haddock (Created page with "== Citation == Neijenhuis, Tim / van Keulen, Siri C. / Bonvin, Alexandre M. J. J. Interface refinement of low- to medium-resolution Cryo-EM complexes using HADDOCK2.4. 2022....") (current)
- 11:55, 3 May 2022 (diff | hist) . . (+113) . . Main Page (→Fitting and docking)
- 11:48, 3 May 2022 (diff | hist) . . (+1,395) . . N 2021Kimanius Relion4 (Created page with "== Citation == Kimanius, Dari / Dong, Liyi / Sharov, Grigory / Nakane, Takanori / Scheres, Sjors H. W. New tools for automated cryo-EM single-particle analysis in RELION-4.0....") (current)
- 11:47, 3 May 2022 (diff | hist) . . (+64) . . Main Page (→Software)
- 11:42, 3 May 2022 (diff | hist) . . (+1,692) . . N 2022Skalidis Endogenous (Created page with "== Citation == <Skalidis, Ioannis / Kyrilis, Fotis L. / Tüting, Christian / Hamdi, Farzad / Chojnowski, Grzegorz / Kastritis, Panagiotis L. Cryo-EM and artificial intelligen...") (current)
- 11:41, 3 May 2022 (diff | hist) . . (+98) . . Main Page (→3D Heterogeneity)
- 11:31, 3 May 2022 (diff | hist) . . (+1,562) . . N 2022Rabuck Quant (Created page with "== Citation == Rabuck-Gibbons, Jessica N. / Lyumkis, Dmitry / Williamson, James R. Quantitative mining of compositional heterogeneity in cryo-EM datasets of ribosome assembly...") (current)
- 11:30, 3 May 2022 (diff | hist) . . (+83) . . Main Page (→3D Heterogeneity)
- 14:07, 19 April 2022 (diff | hist) . . (+89) . . Main Page (→Online courses and Learning material)
- 14:06, 19 April 2022 (diff | hist) . . (+120) . . Main Page (→Online courses and Learning material)
- 13:20, 13 April 2022 (diff | hist) . . (+2,079) . . N 2022Krieger Prody2 (Created page with "== Citation == Krieger, James Michael / Sorzano, Carlos Oscar S. / Carazo, Jose Maria / Bahar, Ivet. Protein dynamics developments for the large scale and cryoEM: case study...") (current)
- 13:15, 13 April 2022 (diff | hist) . . (+126) . . Main Page (→Fitting and docking)
- 13:11, 13 April 2022 (diff | hist) . . (+2,861) . . N 2022Sorzano Bias (Created page with "== Citation == Sorzano, C. O. S. / Jiménez-Moreno, A. / Maluenda, D. / Martinez, M. / Ramirez-Aportela, E. / Melero, R. / Cuervo, A. / Conesa, J. / Filipovic, J. / Conesa, P...") (current)
- 13:09, 13 April 2022 (diff | hist) . . (+91) . . Main Page (→Validation)
- 12:55, 13 April 2022 (diff | hist) . . (+1,563) . . N 2022Vant MD (Created page with "== Citation == Vant, John W. / Sarkar, Daipayan / Nguyen, Jonathan / Baker, Alexander T. / Vermaas, Josh V. / Singharoy, Abhishek. Exploring cryo-electron microscopy with mol...") (current)
- 12:53, 13 April 2022 (diff | hist) . . (+85) . . Main Page (→Books and reviews)
- 21:58, 7 April 2022 (diff | hist) . . (+1,626) . . N 2022Chen Detergents (Created page with "== Citation == Chen, Shaoxia / Li, Jade / Vinothkumar, Kutti R. / Henderson, Richard. Interaction of human erythrocyte catalase with air-water interface in cryoEM. 2022-02, M...") (current)
- 21:56, 7 April 2022 (diff | hist) . . (+86) . . Main Page (→Sample preparation)
- 21:53, 7 April 2022 (diff | hist) . . (+1,010) . . N 2022Scher FIB (Created page with "== Citation == Scher, Nadav / Rechav, Katya / Paul-Gilloteaux, Perrine / Avinoam, Ori. Sample preparation and image registration for correlative cryo-FM and cryo-FIB-SEM of p...") (current)
- 21:52, 7 April 2022 (diff | hist) . . (+92) . . Main Page (→Sample preparation)
- 21:46, 7 April 2022 (diff | hist) . . (+1,970) . . N 2021Jimenez Scipion (Created page with "== Citation == Jiménez-Moreno, A. / Del Caño, L. / Martínez, M. / Ramírez-Aportela, E. / Cuervo, A. / Melero, R. / Sánchez-García, R. / Strelak, D. / Fernández-Giméne...") (current)
- 21:41, 7 April 2022 (diff | hist) . . (+87) . . Main Page (→Software)
- 21:12, 7 April 2022 (diff | hist) . . (+1,665) . . N 2022Caldraft Tilt (Created page with "== Citation == Calcraft, Thomas / Rosenthal, Peter B. Cryogenic electron microscopy approaches that combine images and tilt series. 2022-02. Microscopy, Vol. 71, p. i15-i22...") (current)
- 21:11, 7 April 2022 (diff | hist) . . (+82) . . Main Page (→Books and reviews)
- 11:04, 7 April 2022 (diff | hist) . . (+1,465) . . N 2020Zachs FIB (Created page with "== Citation == Zachs, Tobias / Schertel, Andreas / Medeiros, João / Weiss, Gregor L. / Hugener, Jannik / Matos, Joao / Pilhofer, Martin. Fully automated, sequential focused...") (current)
- 11:03, 7 April 2022 (diff | hist) . . (+61) . . Main Page (→Sample preparation)
- 10:57, 7 April 2022 (diff | hist) . . (+1,455) . . N 2021Herzik Setup (Created page with "== Citation == Herzik, Mark A. Setting Up Parallel Illumination on the Talos Arctica for High-Resolution Data Collection. 2021. CryoEM. p. 125-144 == Abstract == Illuminati...") (current)
- 10:56, 7 April 2022 (diff | hist) . . (+70) . . Main Page (→Automated data collection)
- 10:47, 7 April 2022 (diff | hist) . . (+1,901) . . N 2021Lander Review (Created page with "== Citation == Lander, Gabriel C. / Glaeser, Robert M. Conquer by cryo-EM without physically dividing. 2021-11. Biochemical Society transactions, Vol. 49, p. 2287-2298 == Ab...") (current)
- 10:44, 7 April 2022 (diff | hist) . . (+72) . . Main Page (→Books and reviews)
- 10:29, 7 April 2022 (diff | hist) . . (+1,543) . . N 2022Boehning CompressedSensing (Created page with "== Citation == Böhning, Jan / Bharat, Tanmay A. M. / Collins, Sean M. Compressed sensing for electron cryotomography and high-resolution subtomogram averaging of biological...") (current)
- 10:28, 7 April 2022 (diff | hist) . . (+96) . . Main Page (→Subtomogram analysis)
- 10:17, 7 April 2022 (diff | hist) . . (+956) . . N 2022Treder DL (Created page with "== Citation == Treder, Kevin P. / Huang, Chen / Kim, Judy S. / Kirkland, Angus I. Applications of deep learning in electron microscopy. 2022-02, Microscopy, Vol. 71, p. i100-...") (current)
- 10:16, 7 April 2022 (diff | hist) . . (+81) . . Main Page (→Books and reviews)
- 10:13, 7 April 2022 (diff | hist) . . (+1,781) . . N 2022Namba Review (Created page with "== Citation == Namba, Keiichi / Makino, Fumiaki. Recent progress and future perspective of electron cryomicroscopy for structural life sciences. 2022, Microscopyç, Vol. 71,...") (current)
- 10:12, 7 April 2022 (diff | hist) . . (+72) . . Main Page (→Books and reviews)
- 21:44, 23 March 2022 (diff | hist) . . (+1,392) . . N 2022Olek Icebreaker (Created page with "== Citation == Olek, Mateusz / Cowtan, Kevin / Webb, Donovan / Chaban, Yuriy / Zhang, Peijun. IceBreaker: Software for high-resolution single-particle cryo-EM with non-unifor...") (current)
- 21:43, 23 March 2022 (diff | hist) . . (+98) . . Main Page (→Automatic particle picking)
- 21:37, 23 March 2022 (diff | hist) . . (+1,712) . . N 2022Peck 200 (Created page with "== Citation == Peck, Jared V. / Fay, J. F. / Strauss, J. D. High-speed high-resolution data collection on a 200 keV cryo-TEM. 2022, IUCrJ, Vol. 9, No. 2 == Abstract == Limi...") (current)
- 21:36, 23 March 2022 (diff | hist) . . (+99) . . Main Page (→Automated data collection)
- 21:32, 23 March 2022 (diff | hist) . . (+2,703) . . N 2022Gomez Hierarchical (Created page with "== Citation == Gomez-Blanco, J. / Kaur, S. / Strauss, M. / Vargas, J. Hierarchical autoclassification of cryo-EM samples and macromolecular energy landscape determination. 20...") (current)
- 21:31, 23 March 2022 (diff | hist) . . (+85) . . Main Page (→3D Heterogeneity)
- 21:26, 23 March 2022 (diff | hist) . . (+1,484) . . N 2022Wang Review (Created page with "== Citation == Wang, Fengbin / Gnewou, Ordy / Solemanifar, Armin / Conticello, Vincent P. / Egelman, Edward H. Cryo-EM of Helical Polymers. 2022-02, Chemical reviews == Abst...") (current)
- 21:24, 23 March 2022 (diff | hist) . . (0) . . Main Page (→Books and reviews)
- 21:24, 23 March 2022 (diff | hist) . . (+93) . . Main Page (→Books and reviews)
- 21:21, 23 March 2022 (diff | hist) . . (+1,150) . . N 2022Forster Review (Created page with "== Citation == Förster, Friedrich. Subtomogram analysis: The sum of a tomogram’s particles reveals molecular structure in situ. 2022, Journal of Structural Biology: X,...") (current)
- 21:20, 23 March 2022 (diff | hist) . . (+72) . . Main Page (→Books and reviews)
- 21:17, 23 March 2022 (diff | hist) . . (+1,579) . . N 2022Zhang CRITASSER (Created page with "== Citation == Zhang, Xi / Zhang, Biao / Freddolino, Peter L. / Zhang, Yang. CR-I-TASSER: assemble protein structures from cryo-EM density maps using deep convolutional neura...") (current)
- 21:16, 23 March 2022 (diff | hist) . . (+105) . . Main Page (→Fitting and docking)
- 21:11, 23 March 2022 (diff | hist) . . (+1,568) . . N 2022Antanasijevic ab (Created page with "== Citation == Antanasijevic, Aleksandar / Bowman, Charles A. / Kirchdoerfer, Robert N. / Cottrell, Christopher A. / Ozorowski, Gabriel / Upadhyay, Amit A. / Cirelli, Kimberl...") (current)
- 21:10, 23 March 2022 (diff | hist) . . (+94) . . Main Page (→Fitting and docking)
- 21:02, 23 March 2022 (diff | hist) . . (+1,086) . . N 2022Vargas tubular (Created page with "== Citation == Vargas, Javier / Gómez-Pedrero, José A. / Quiroga, J. Antonio / Alonso, José. Enhancement of Cryo-EM maps by a multiscale tubular filter. 2022-01, Optics ex...") (current)
- 21:01, 23 March 2022 (diff | hist) . . (+85) . . Main Page (→Sharpening of high resolution information)
- 20:27, 23 March 2022 (diff | hist) . . (+2,280) . . N 2022Palmer Local (Created page with "== Citation == Palmer, Colin M. / Aylett, Christopher H. S. Real space in cryo-EM: the future is local. 2022-02, Acta crystallographica. Section D, Structural biology, Vol. 7...") (current)
- 20:20, 23 March 2022 (diff | hist) . . (+71) . . Main Page (→Books and reviews)
- 19:59, 23 March 2022 (diff | hist) . . (+494) . . N 2022Jones Comment (Created page with "== Citation == Jones, David T. / Thornton, Janet M. The impact of AlphaFold2 one year on. 2022, Nature methods, Vol. 19, No. 1, p. 15-20 == Abstract == Protein structures p...") (current)
- 19:54, 23 March 2022 (diff | hist) . . (+99) . . Main Page (→Books and reviews)
- 19:48, 23 March 2022 (diff | hist) . . (+737) . . N 2022Subramaniam Comment (Created page with "== Citation == Subramaniam, Sriram / Kleywegt, Gerard J. A paradigm shift in structural biology. 2022-01, Nature methods, Vol. 19, p. 20-23 == Abstract == The release of pr...") (current)
- 19:47, 23 March 2022 (diff | hist) . . (+105) . . Main Page (→Books and reviews)
- 19:42, 23 March 2022 (diff | hist) . . (+1,636) . . N 2022Klumpe FIB (Created page with "== Citation == Klumpe, Sven / Fung, Herman Kh / Goetz, Sara K. / Zagoriy, Ievgeniia / Hampoelz, Bernhard / Zhang, Xiaojie / Erdmann, Philipp S. / Baumbach, Janina / Müller,...") (current)
- 19:41, 23 March 2022 (diff | hist) . . (+88) . . Main Page (→Relationship to other structural information sources)
- 19:38, 23 March 2022 (diff | hist) . . (+1,773) . . N 2021Raimondi Review (Created page with "== Citation == Raimondi, Vittoria / Grinzato, Alessandro. A basic introduction to single particles cryo-electron microscopy. 2022, AIMS Biophysics, Vol. 9, No. 1. p. 5-20 ==...") (current)
- 19:33, 23 March 2022 (diff | hist) . . (+62) . . Main Page (→Books and reviews)
- 19:30, 23 March 2022 (diff | hist) . . (+839) . . N 2022Ourmazd Comment (Created page with "== Citation == Ourmazd, Abbas / Moffat, Keith / Lattman, Eaton Edward. Structural biology is solved - now what? 2022-01, Nature methods, Vol. 19, p. 24-26 == Abstract == Th...") (current)
- 19:29, 23 March 2022 (diff | hist) . . (+101) . . Main Page (→Books and reviews)
- 15:07, 23 March 2022 (diff | hist) . . (+1,928) . . N 2022Ni EmClarity (Created page with "== Citation == Ni, Tao / Frosio, Thomas / Mendonça, Luiza / Sheng, Yuewen / Clare, Daniel / Himes, Benjamin A. / Zhang, Peijun. High-resolution in situ structure determinati...") (current)
- 15:06, 23 March 2022 (diff | hist) . . (+74) . . Main Page (→Software)
- 15:00, 23 March 2022 (diff | hist) . . (+1,511) . . N 2022Graziadei CrossLinking (Created page with "== Citation == Graziadei, Andrea / Rappsilber, Juri. Leveraging crosslinking mass spectrometry in structural and cell biology. 2022-01, Structure, Vol. 30, p. 37-54 == Abstr...") (current)
- 14:59, 23 March 2022 (diff | hist) . . (+110) . . Main Page (→Relationship to other structural information sources)
- 09:04, 23 March 2022 (diff | hist) . . (+2,032) . . N 2022Huang DenoisingAndPicking (Created page with "== Citation == Huang, Qinwen / Zhou, Ye / Liu, Hsuan-Fu / Bartesaghi, Alberto. Weakly Supervised Learning for Joint Image Denoising and Protein Localization in Cryo-Electron...") (current)
- 09:02, 23 March 2022 (diff | hist) . . (+110) . . Main Page (→Automatic particle picking)
- 08:45, 23 March 2022 (diff | hist) . . (+1,742) . . N 2022Ravikumar SideChains (Created page with "== Citation == Ravikumar, Ashraya / Gopnarayan, Mrugsen Nagsen / Subramaniam, Sriram / Srinivasan, Narayanaswamy. Comparison of side-chain dispersion in protein structures de...") (current)
- 08:43, 23 March 2022 (diff | hist) . . (+152) . . Main Page (→Image formation)
- 08:27, 23 March 2022 (diff | hist) . . (+2,051) . . N 2021Lane NegativeBias (Created page with "== Citation == Lane, Ryan / Vos, Yoram / Wolters, Anouk H. G. / Kessel, Luc van / Chen, S. Elisa / Liv, Nalan / Klumperman, Judith / Giepmans, Ben N. G. / Hoogenboom, Jacob P...") (current)
- 08:25, 23 March 2022 (diff | hist) . . (+86) . . Main Page (→Automated data collection)
- 08:19, 23 March 2022 (diff | hist) . . (+2,396) . . N 2021Behkamal Secondary (Created page with "== Citation == Behkamal, Bahareh / Naghibzadeh, Mahmoud / Saberi, Mohammad Reza / Tehranizadeh, Zeinab Amiri / Pagnani, Andrea / Al Nasr, Kamal. Three-Dimensional Graph Match...") (current)
- 08:18, 23 March 2022 (diff | hist) . . (+92) . . Main Page (→Fitting and docking)
- 08:10, 23 March 2022 (diff | hist) . . (+1,637) . . N 2021Li detergents (Created page with "== Citation == Li, Bufan / Zhu, Dongjie / Shi, Huigang / Zhang, Xinzheng. Effect of charge on protein preferred orientation at the air-water interface in cryo-electron micros...") (current)
- 08:06, 23 March 2022 (diff | hist) . . (+92) . . Main Page (→Sample preparation)
- 12:36, 11 February 2022 (diff | hist) . . (+2,379) . . N 2021Dimchev filaments (Created page with "== Citation == Dimchev, Georgi / Amiri, Behnam / Fäßler, Florian / Falcke, Martin / Schur, Florian Km. Computational toolbox for ultrastructural quantitative analysis of fi...") (current)
- 12:34, 11 February 2022 (diff | hist) . . (+82) . . Main Page (→Segmentation)
- 07:39, 11 February 2022 (diff | hist) . . (+1,715) . . N 2021Frangakis Review (Created page with "== Citation == Frangakis, Achilleas S. It's noisy out there! A review of denoising techniques in cryo-electron tomography. 2021. J. structural biology, 213: 107804 == Abstr...") (current)
- 07:38, 11 February 2022 (diff | hist) . . (+94) . . Main Page (→Books and reviews)
- 18:42, 30 December 2021 (diff | hist) . . (+1,265) . . N 2022Chojnowski findMySeq (Created page with "== Citation == Chojnowski, G.; Simpkin, A. J.; Leonardo, D. A.; Seifert-Davila, W.; Vivas-Ruiz, D. E.; Keegan, R. & Rigden, D. findMySequence: a neural-network-based appr...") (current)
- 18:42, 30 December 2021 (diff | hist) . . (+98) . . Main Page (→Fitting and docking)
- 18:25, 30 December 2021 (diff | hist) . . (+2,212) . . N 2021Li PickerOptimizers (Created page with "== Citation == Li, H.; Chen, G.; Gao, S.; Li, J. & Zhang, F. PickerOptimizer: A Deep Learning-Based Particle Optimizer for Cryo-Electron Microscopy Particle-Picking Algorithm...") (current)
- 18:24, 30 December 2021 (diff | hist) . . (+103) . . Main Page (→Automatic particle picking)
- 17:18, 30 December 2021 (diff | hist) . . (-1) . . Main Page (→Subtomogram analysis)
- 09:32, 13 December 2021 (diff | hist) . . (+1,385) . . N 2021Strelak Xmipp (Created page with "== Citation == Strelak, D.; Jiménez-Moreno, A.; Vilas, J. L.; Ramírez-Aportela, E.; Sánchez-García, R.; Maluenda, D.; Vargas, J.; Herreros, D.; Fernández-Giménez, E.; d...") (current)
- 09:31, 13 December 2021 (diff | hist) . . (+57) . . Main Page (→Software)
- 16:11, 10 December 2021 (diff | hist) . . (-46) . . Main Page (→Electron tomography)
- 06:24, 26 November 2021 (diff | hist) . . (-73) . . Main Page (→Image formation)
- 13:40, 25 November 2021 (diff | hist) . . (+1,682) . . N 2021Nakasako Landscape (Created page with "== Citation == Nakasako, M. Energy Landscape and Hydration of Proteins. Hydration Structures of Proteins, Springer, 2021, 229-250 == Abstract == At cryogenic temperature,...") (current)
- 13:39, 25 November 2021 (diff | hist) . . (+94) . . Main Page (→3D Heterogeneity)
- 13:25, 25 November 2021 (diff | hist) . . (+1,247) . . N 2021Bieber FIBET (Created page with "== Citation == Bieber, A.; Capitanio, C.; Wilfling, F.; Plitzko, J. & Erdmann, P. S. Sample Preparation by 3D-Correlative Focused Ion Beam Milling for High-Resolution Cry...") (current)
- 13:24, 25 November 2021 (diff | hist) . . (+95) . . Main Page (→Sample preparation)
- 12:12, 19 November 2021 (diff | hist) . . (+159) . . Main Page (→Electron microscopy images)
- 08:27, 12 November 2021 (diff | hist) . . (+2,443) . . N 2021Harastani NMA (Created page with "== Citation == Harastani, M.; Eltsov, M.; Leforestier, A. & Jonic, S. HEMNMA-3D: Cryo Electron Tomography Method Based on Normal Mode Analysis to Study Continuous Conform...") (current)
- 08:25, 12 November 2021 (diff | hist) . . (+86) . . Main Page (→Subtomogram analysis)
- 08:07, 12 November 2021 (diff | hist) . . (+1,587) . . N 2022Naydenova Grid (Created page with "== Citation == Naydenova, K. & Russo, C. J. Integrated wafer-scale manufacturing of electron cryomicroscopy specimen supports. Ultramicroscopy, 2022, 232, 113396 == Abs...") (current)
- 08:07, 12 November 2021 (diff | hist) . . (+121) . . Main Page (→Sample preparation)
- 07:37, 12 November 2021 (diff | hist) . . (+1,598) . . N 2022Ecoffet MorphOT (Created page with "== Citation == Ecoffet, A.; Woollard, G.; Kushner, A.; Poitevin, F. & Duc, K. D. Application of transport-based metric for continuous interpolation between cryo-EM densit...") (current)
- 07:35, 12 November 2021 (diff | hist) . . (+95) . . Main Page (→3D Heterogeneity)
- 16:06, 11 November 2021 (diff | hist) . . (+602) . . N 2021Egerton Inelastic (Created page with "== Citation == Egerton, R.; Blackburn, A.; Herring, R.; Wu, L. & Zhu, Y. Direct measurement of the PSF for Coulomb delocalization--a reconsideration. Ultramicroscopy, 202...") (current)
- 15:59, 11 November 2021 (diff | hist) . . (+71) . . Main Page (→Image formation)
- 12:45, 8 November 2021 (diff | hist) . . (+1,460) . . N 2021Fernandez TomoAlign (Created page with "== Citation == Fernandez, J.-J. & Li, S. TomoAlign: A novel approach to correcting sample motion and 3D CTF in CryoET. J. Structural Biology, 2021, 213, 107778 == Abstr...") (current)
- 12:44, 8 November 2021 (diff | hist) . . (-48) . . Main Page (→3D reconstruction)
- 12:44, 8 November 2021 (diff | hist) . . (+98) . . Main Page (→3D reconstruction)
- 12:16, 8 November 2021 (diff | hist) . . (+1,737) . . N 2021Vuillemot NMA (Created page with "== Citation == Vuillemot, R. & Jonic, S. Combined Bayesian and Normal Mode Flexible Fitting with Hamiltonian Monte Carlo Sampling for Cryo Electron Microscopy. 29th Europ...") (current)
- 12:15, 8 November 2021 (diff | hist) . . (+80) . . Main Page (→Fitting and docking)
- 12:14, 8 November 2021 (diff | hist) . . (+5) . . Main Page (→3D Heterogeneity)
- 12:07, 8 November 2021 (diff | hist) . . (+1,537) . . N 2021Hamitouche NMADL (Created page with "== Citation == Hamitouche, I. & Jonic, S. Deep learning of elastic 3D shapes for cryo electron microscopy analysis of continuous conformational changes of biomolecules. 2...") (current)
- 12:06, 8 November 2021 (diff | hist) . . (+114) . . Main Page (→3D Heterogeneity)
- 11:52, 8 November 2021 (diff | hist) . . (+1,921) . . N 2021Lucas Cistem (Created page with "== Citation == Lucas, B. A.; Himes, B. A.; Xue, L.; Grant, T.; Mahamid, J. & Grigorieff, N. Locating macromolecular assemblies in cells by 2D template matching with cisTE...") (current)
- 11:51, 8 November 2021 (diff | hist) . . (+91) . . Main Page (→Subtomogram analysis)
- 11:23, 8 November 2021 (diff | hist) . . (+1,419) . . N 2021He EMNUSS (Created page with "== Citation == He, J. & Huang, S.-Y. EMNUSS: a deep learning framework for secondary structure annotation in cryo-EM maps. Briefings in bioinformatics, 2021, bbab156 ==...") (current)
- 11:22, 8 November 2021 (diff | hist) . . (+115) . . Main Page (→Segmentation)
- 10:57, 8 November 2021 (diff | hist) . . (+1,566) . . N 2021Chen Fast (Created page with "== Citation == Chen, Y.-X.; Xie, R.; Yang, Y.; He, L.; Feng, D. & Shen, H.-B. Fast Cryo-EM Image Alignment Algorithm Using Power Spectrum Features. J. Chemical Informatio...") (current)
- 10:56, 8 November 2021 (diff | hist) . . (+73) . . Main Page (→2D Alignment)
- 10:27, 8 November 2021 (diff | hist) . . (+5) . . Main Page (→2D Preprocessing)
- 09:54, 8 November 2021 (diff | hist) . . (+1,031) . . N 2021Rao Wasserstein (Created page with "== Citation == Rao, R.; Moscovich, A. & Singer, A. Wasserstein K-Means for Clustering Tomographic Projections. Proc. Machine Learning for Structural Biology Workshop, 202...") (current)
- 09:53, 8 November 2021 (diff | hist) . . (+105) . . Main Page (→2D Classification and clustering)
- 09:52, 8 November 2021 (diff | hist) . . (-100) . . Main Page (→2D Alignment)
- 09:52, 8 November 2021 (diff | hist) . . (+99) . . Main Page (→2D Alignment)
- 09:45, 8 November 2021 (diff | hist) . . (+1,801) . . N 2021Chung CryoRALIB (Created page with "== Citation == Chung, S.-C.; Hung, C.-Y.; Siao, H.-L.; Wu, H.-Y.; Chang, W.-H. & Tu, I.-P. Cryo-Ralib-A Modular Library for Accelerating Alignment in CRYO-EM. 2021 IEEE I...") (current)
- 09:44, 8 November 2021 (diff | hist) . . (+76) . . Main Page (→2D Alignment)
- 09:36, 8 November 2021 (diff | hist) . . (+2,613) . . N 2021Du Active (Created page with "== Citation == Du, X.; Wang, H.; Zhu, Z.; Zeng, X.; Chang, Y.-W.; Zhang, J.; Xing, E. & Xu, M. Active learning to classify macromolecular structures in situ for less supe...") (current)
- 09:35, 8 November 2021 (diff | hist) . . (+90) . . Main Page (→Subtomogram analysis)
- 09:05, 8 November 2021 (diff | hist) . . (+1,416) . . N 2021Heimowitz Centering (Created page with "== Citation == Heimowitz, A.; Sharon, N. & Singer, A. Centering noisy images with application to cryo-EM. SIAM J. Imaging Sciences, 2021, 14, 689-716 == Abstract == We...") (current)
- 09:04, 8 November 2021 (diff | hist) . . (+68) . . Main Page (→2D Alignment)
- 08:35, 8 November 2021 (diff | hist) . . (+1,740) . . N 2020Chung 2SDR (Created page with "== Citation == Chung, S.-C.; Wang, S.-H.; Niu, P.-Y.; Huang, S.-Y.; Chang, W.-H.; Tu, I. Two-stage dimension reduction for noisy high-dimensional images and application to Cr...") (current)
- 08:31, 8 November 2021 (diff | hist) . . (+61) . . Main Page (→2D Preprocessing)
- 09:06, 22 October 2021 (diff | hist) . . (+927) . . N 2021Maji BlackBox (Created page with "== Citation == Maji, S. & Frank, J. What’s in the Black Box?--A Perspective on Software in Cryo-Electron Microscopy. Biophysical J., 2021, 120, 4307-4311 == Abstract...") (current)
- 09:05, 22 October 2021 (diff | hist) . . (+80) . . Main Page (→Software)
- 07:57, 22 October 2021 (diff | hist) . . (+2,385) . . N 2021Wypych gP2S (Created page with "== Citation == Wypych, D.; Kierecki, D.; Golebiowski, F. M. & Rohou, A. gP2S, an Information Management System for CryoEM Experiments. J. visualized experiments: JoVE, 20...") (current)
- 07:53, 22 October 2021 (diff | hist) . . (+65) . . Main Page (→Automated data collection)
- 07:44, 22 October 2021 (diff | hist) . . (+2,058) . . N 2021Herreros Zernikes3D (Created page with "== Citation == Herreros, D.; Lederman, R. R.; Krieger, J.; Jiménez-Moreno, A.; Mart\inez, M.; Myška, D.; Strelak, D.; Filipovic, J.; Bahar, I.; Carazo, J. &...") (current)
- 07:40, 22 October 2021 (diff | hist) . . (+100) . . Main Page (→3D Heterogeneity)
- 07:29, 22 October 2021 (diff | hist) . . (+1,829) . . N 2021Zhong CryoDRGN2 (Created page with "== Citation == Zhong, E. D.; Lerer, A.; Davis, J. H. & Berger, B. CryoDRGN2: Ab Initio Neural Reconstruction of 3D Protein Structures From Real Cryo-EM Images. Proc. IEEE...") (current)
- 07:24, 22 October 2021 (diff | hist) . . (+112) . . Main Page (→3D Alignment)
- 07:11, 22 October 2021 (diff | hist) . . (+1,314) . . N 2021Nashed CryoPoseNet (Created page with "== Citation == Nashed, Y. S.; Poitevin, F.; Gupta, H.; Woollard, G.; Kagan, M.; Yoon, C. H. & Ratner, D. CryoPoseNet: End-to-End Simultaneous Learning of Single-Particle...") (current)
- 07:10, 22 October 2021 (diff | hist) . . (+81) . . Main Page (→3D Alignment)
- 06:55, 22 October 2021 (diff | hist) . . (+1,040) . . N 2021Zhang Pegylation (Created page with "== Citation == Zhang, Z.; Shigematsu, H.; Shimizu, T. & Ohto, U. Improving particle quality in cryo-EM analysis using a PEGylation method. Structure, 2021, 29, 1192-1199....") (current)
- 06:54, 22 October 2021 (diff | hist) . . (+93) . . Main Page (→Sample preparation)
- 08:59, 5 October 2021 (diff | hist) . . (+1,482) . . N 2021Sanchez DeepEMhancer (Created page with "== Citation == Sanchez-Garcia, R.; Gomez-Blanco, J.; Cuervo, A.; Carazo, J. M.; Sorzano, C. O. S. & Vargas, J. DeepEMhancer: a deep learning solution for cryo-EM volume p...") (current)
- 08:58, 5 October 2021 (diff | hist) . . (+93) . . Main Page (→Sharpening of high resolution information)
- 08:49, 5 October 2021 (diff | hist) . . (+1,781) . . N 2021Sorzano Scipion (Created page with "== Citation == Sorzano, C. O. S.; Jiménez-Moreno, A.; Maluenda, D.; Ram\irez-Aportela, E.; Mart\inez, M.; Cuervo, A.; Melero, R.; Conesa, J. J.; Sánchez-Garc\ia, R.; Strela...") (current)
- 08:48, 5 October 2021 (diff | hist) . . (+108) . . Main Page (→Software)
- 09:50, 20 September 2021 (diff | hist) . . (+1,027) . . N 2021Yonekura Hole (Created page with "== Citation == Yonekura, K.; Maki-Yonekura, S.; Naitow, H.; Hamaguchi, T. & Takaba, K. Machine learning-based real-time object locator/evaluator for cryo-EM data collecti...") (current)
- 09:48, 20 September 2021 (diff | hist) . . (+75) . . Main Page (→Automated data collection)
- 09:40, 20 September 2021 (diff | hist) . . (+2,002) . . N 2021Engstrom Nitrogen (Created page with "== Citation == Engstrom, T.; Clinger, J. A.; Spoth, K. A.; Clarke, O. B.; Closs, D. S.; Jayne, R.; Apker, B. & Thorne, R. High-resolution single-particle cryo-EM of sampl...") (current)
- 09:39, 20 September 2021 (diff | hist) . . (+81) . . Main Page (→Sample preparation)
- 09:09, 20 September 2021 (diff | hist) . . (+1,843) . . N 2021Scaramuzza Dynamo (Created page with "== Citation == Scaramuzza, S. & Castaño-Díez, D. Step-by-step guide to efficient subtomogram averaging of virus-like particles with Dynamo. PLoS biology, 2021, 19, e300...") (current)
- 08:55, 20 September 2021 (diff | hist) . . (+86) . . Main Page (→Subtomogram analysis)
- 08:27, 20 September 2021 (diff | hist) . . (+1,392) . . N 2021Burt RWD (Created page with "== Citation == Burt, A.; Gaifas, L.; Dendooven, T. & Gutsche, I. A flexible framework for multi-particle refinement in cryo-electron tomography. PLoS biology, 2021, 19, e...") (current)
- 08:26, 20 September 2021 (diff | hist) . . (+86) . . Main Page (→Software)
- 06:10, 20 September 2021 (diff | hist) . . (+1,416) . . N 2021Pintilie Validation (Created page with "== Citation == Pintilie, G. & Chiu, W. Validation, analysis and annotation of cryo-EM structures. Acta crystallographica. Section D, Structural biology, 2021, 77, 1142-11...") (current)
- 06:08, 20 September 2021 (diff | hist) . . (+81) . . Main Page (→Validation)
- 05:50, 20 September 2021 (diff | hist) . . (+5) . . Main Page (→Subtomogram analysis)
- 05:49, 20 September 2021 (diff | hist) . . (+1,720) . . N 2021Zeng OpenSet (Created page with "== Citation == Zeng, Y.; Howe, G.; Yi, K.; Zeng, X.; Zhang, J.; Chang, Y.-W. & Xu, M. Unsupervised Domain Alignment Based Open Set Structural Recognition of Macromolecule...") (current)
- 05:48, 20 September 2021 (diff | hist) . . (+94) . . Main Page (→Subtomogram analysis)
- 09:53, 17 September 2021 (diff | hist) . . (+1,907) . . N 2021Fernandez Adjustment (Created page with "== Citation == Fernández-Giménez, E.; Mart\inez, M.; Sánchez-Garc\ia, R.; Marabini, R.; Ram\irez-Aportela, E.; Conesa, P.; Carazo, J. M. & Sorzano, C...") (current)
- 09:44, 17 September 2021 (diff | hist) . . (+103) . . Main Page (→Sharpening of high resolution information)
- 07:46, 17 September 2021 (diff | hist) . . (+2,228) . . N 2021Gupta CryoGAN (Created page with "== Citation == Gupta, H.; McCann, M. T.; Donati, L. & Unser, M. Cryogan: A new reconstruction paradigm for single-particle cryo-em via deep adversarial learning. IEEE Tra...") (current)
- 07:44, 17 September 2021 (diff | hist) . . (+93) . . Main Page (→3D Reconstruction)
- 06:49, 17 September 2021 (diff | hist) . . (+2,431) . . N 2021Geng Nudim (Created page with "== Citation == Geng, Z.; She, Z.; Zhou, Q.; Dong, Z.; Zhan, F.; Zhang, H.; Xu, J.; Gao, Z. & Dong, Y. NUDIM: A non-uniform fast Fourier transform based dual-space constra...") (current)
- 06:48, 17 September 2021 (diff | hist) . . (+108) . . Main Page (→3D reconstruction)
- 06:25, 17 September 2021 (diff | hist) . . (+1,263) . . N 2021Fan Denoising (Created page with "== Citation == Fan, Y. & Zhao, Z. Cryo-Electron Microscopy Image Denoising Using Multi-Frequency Vector Diffusion Maps. 2021 IEEE Intl. Conf. on Image Processing (ICIP),...") (current)
- 06:22, 17 September 2021 (diff | hist) . . (+86) . . Main Page (→2D Preprocessing)
- 08:43, 30 August 2021 (diff | hist) . . (+1,381) . . N 2021Jonaid Liquid (Created page with "== Citation == Jonaid, G. M.; Dearnaley, W. J.; Casasanta, M. A.; Kaylor, L.; Berry, S.; Dukes, M. J.; Spilman, M. S.; Gray, J. L. & Kelly, D. F. High-Resolution Imaging...") (current)
- 08:38, 30 August 2021 (diff | hist) . . (+54) . . Main Page (→Sample preparation)
- 10:52, 14 August 2021 (diff | hist) . . (-7) . . 2021Kazemi Enrich (→Abstract) (current)
- 10:51, 14 August 2021 (diff | hist) . . (+1,935) . . N 2021Kazemi Enrich (Created page with "== Citation == Kazemi, M.; Sorzano, C. O. S.; Carazo, J.; des Georges, A.; Abrishami, V. & Vargas, J. ENRICH: a fast method to improve the quality of flexible macromolecu...")
- 10:49, 14 August 2021 (diff | hist) . . (+127) . . Main Page (→3D Heterogeneity)
- 08:06, 6 August 2021 (diff | hist) . . (+1,617) . . N 2021Chen GM (Created page with "== Citation == Chen, M. & Ludtke, S. J. Deep learning-based mixed-dimensional Gaussian mixture model for characterizing variability in cryo-EM. Nature Methods, 2021, 18:...") (current)
- 08:03, 6 August 2021 (diff | hist) . . (+125) . . Main Page (→3D Heterogeneity)
- 07:40, 6 August 2021 (diff | hist) . . (+1,150) . . N 2021Mendez Graph (Created page with "== Citation == Méndez, J.; Garduño, E.; Carazo, J. M. & Sorzano, C. O. S. Identification of incorrectly oriented particles in Cryo-EM Single Particle Analys...") (current)
- 07:37, 6 August 2021 (diff | hist) . . (+87) . . Main Page (→Validation)
- 08:42, 21 July 2021 (diff | hist) . . (+1,513) . . N 2021Ki Conformational (Created page with "== Citation == Ki, H.; Jo, J.; Kim, Y.; Kim, T. W.; Kim, C.; Kim, Y.; Kim, C. W.; Muniyappan, S.; Lee, S. J.; Kim, Y. & others. Uncovering the Conformational Distribution...") (current)
- 08:40, 21 July 2021 (diff | hist) . . (+120) . . Main Page (→Sample preparation)
- 08:12, 21 July 2021 (diff | hist) . . (+1,197) . . N 2021Yang CRIM (Created page with "== Citation == Sheriff, J.; Fletcher, I. W. & Cumpson, P. J. Computer-readable Image Markers for Automated Registration in Correlative Microscopy - "autoCRIM". Ultramicro...") (current)
- 08:10, 21 July 2021 (diff | hist) . . (+101) . . Main Page (→Automated data collection)
- 13:05, 20 July 2021 (diff | hist) . . (+1,735) . . N 2021Ohashi GRIPS (Created page with "== Citation == Ohashi, M.; Hosokawa, F.; Shinkawa, T. & Iwasaki, K. Evaluation of automated particle picking for cryogenic electron microscopy using high-precision transm...") (current)
- 13:03, 20 July 2021 (diff | hist) . . (+66) . . Main Page (→Automatic particle picking)
- 06:56, 14 July 2021 (diff | hist) . . (+2,061) . . N 2021Giraldo cryoBIFE (Created page with "== Citation == Giraldo-Barreto, J.; Ortiz, S.; Thiede, E. H.; Palacio-Rodriguez, K.; Carpenter, B.; Barnett, A. H. & Cossio, P. A Bayesian approach to extracting free-ene...") (current)
- 06:55, 14 July 2021 (diff | hist) . . (+98) . . Main Page (→3D Heterogeneity)
- 06:46, 14 July 2021 (diff | hist) . . (+2,053) . . N 2021Mori Flexible (Created page with "== Citation == Mori, T.; Terashi, G.; Matsuoka, D.; Kihara, D. & Sugita, Y. Efficient Flexible Fitting Refinement with Automatic Error Fixing for De Novo Structure Modeli...") (current)
- 06:44, 14 July 2021 (diff | hist) . . (+105) . . Main Page (→Fitting and docking)
- 06:28, 14 July 2021 (diff | hist) . . (+1,104) . . N 2021Voss Melting (Created page with "== Citation == Voss, J. M.; Harder, O. F.; Olshin, P. K.; Drabbels, M. & Lorenz, U. J. Rapid Melting and Revitrification as an Approach to Microsecond Time-Resolved Cryo-...") (current)
- 06:13, 14 July 2021 (diff | hist) . . (+122) . . Main Page (→Sample preparation)
- 09:40, 16 June 2021 (diff | hist) . . (+1,046) . . N 2021Jagota GoldNanoparticles (Created page with "== Citation == Jagota, M.; Townshend, R. J. L.; Kang, L.-W.; Bushnell, D. A.; Dror, R. O.; Kornberg, R. D. & Azubel, M. Gold nanoparticles and tilt pairs to assess protei...") (current)
- 09:39, 16 June 2021 (diff | hist) . . (+90) . . Main Page (→Sample preparation)
- 09:20, 16 June 2021 (diff | hist) . . (+2,171) . . N 2021Kojima Preferred (Created page with "== Citation == Kojima, R. & Yoshidome, T. A measure for the identification of preferred particle orientations in cryo-electron microscopy data: A simulation study. Biophysics...") (current)
- 09:18, 16 June 2021 (diff | hist) . . (+83) . . Main Page (→3D Alignment)
- 09:08, 16 June 2021 (diff | hist) . . (+1,599) . . N 2021Casasanta Microchip (Created page with "== Citation == Casasanta, M. A.; Jonaid, G. M.; Kaylor, L.; Luqiu, W. Y.; Solares, M. J.; Schroen, M. L.; Dearnaley, W. J.; Wilson, J.; Dukes, M. J. & Kelly, D. F. Microc...") (current)
- 09:03, 16 June 2021 (diff | hist) . . (+4) . . Main Page (→Sample preparation)
- 09:02, 16 June 2021 (diff | hist) . . (+144) . . Main Page (→Sample preparation)
- 08:52, 16 June 2021 (diff | hist) . . (+1,786) . . N 2020Venkatakrishnan MBIR (Created page with "== Citation == Venkatakrishnan, S.; Juneja, P. & O’Neill, H. Model-based Reconstruction for Single Particle Cryo-Electron Microscopy. 2020 54th Asilomar Conference on S...") (current)
- 08:51, 16 June 2021 (diff | hist) . . (+84) . . Main Page (→3D Reconstruction)
- 08:42, 16 June 2021 (diff | hist) . . (+1,827) . . N 2021Jiang MoAu (Created page with "== Citation == Jiang, X.; Xuan, S.; Zuckermann, R. N.; Glaeser, R. M.; Downing, K. H. & Balsara, N. P. Minimizing Crinkling of Soft Specimens Using Holey Gold Films on Mo...") (current)
- 08:41, 16 June 2021 (diff | hist) . . (+72) . . Main Page (→Sample preparation)
- 08:32, 16 June 2021 (diff | hist) . . (+2,207) . . N 2021Singla Measures (Created page with "== Citation == Singla, J.; White, K. L.; Stevens, R. C. & Alber, F. Assessment of scoring functions to rank the quality of 3D subtomogram clusters from cryo-electron tomo...") (current)
- 08:31, 16 June 2021 (diff | hist) . . (+103) . . Main Page (→Subtomogram analysis)
- 08:11, 16 June 2021 (diff | hist) . . (+1,993) . . N 2021Yang CLEM (Created page with "== Citation == Yang, J. E.; Larson, M. R.; Sibert, B. S.; Shrum, S. & Wright, E. R. CorRelator: Interactive software for real-time high precision cryo-correlative light a...") (current)
- 08:09, 16 June 2021 (diff | hist) . . (+68) . . Main Page (→Automated data collection)
- 08:42, 11 June 2021 (diff | hist) . . (+674) . . N 2021Bai Review (Created page with "== Citation == Bai, X.-c. Seeing atoms by single-particle Cryo-EM. Trends in biochemical sciences, 2021, 46, 253-254 == Abstract == Nakane et al. and Yip et al., for the f...") (current)
- 08:40, 11 June 2021 (diff | hist) . . (+88) . . Main Page (→Books and reviews)
- 08:35, 11 June 2021 (diff | hist) . . (+2,268) . . N 2021Thurber Automated (Created page with "== Citation == Thurber, K. R.; Yin, Y. & Tycko, R. Automated picking of amyloid fibrils from cryo-EM images for helical reconstruction with RELION. Journal of structural...") (current)
- 08:33, 11 June 2021 (diff | hist) . . (+108) . . Main Page (→Helical particles)
- 08:28, 11 June 2021 (diff | hist) . . (+2,342) . . N 2021Han LocalConstraints (Created page with "== Citation == Han, R.; Li, G. & Gao, X. Robust and ultrafast fiducial marker correspondence in electron tomography by a two-stage algorithm considering local constraints...") (current)
- 08:27, 11 June 2021 (diff | hist) . . (+96) . . Main Page (→Image alignment)
- 08:20, 11 June 2021 (diff | hist) . . (+1,745) . . N 2020Mullick SuperResolution (Created page with "== Citation == Mullick, B.; Wang, Y.; Yadav, P. & Farimani, A. B. Learning Super-Resolution Electron Density Map of Proteins using 3D U-Net. Proc. Machine Learning for St...") (current)
- 08:17, 11 June 2021 (diff | hist) . . (+82) . . Main Page (→Sharpening of high resolution information)
- 10:36, 10 June 2021 (diff | hist) . . (+1,562) . . N 2019Kidmose Namdinator (Created page with "== Citation == Kidmose, R. T.; Juhl, J.; Nissen, P.; Boesen, T.; Karlsen, J. L. & Pedersen, B. P. Namdinator: automatic molecular dynamics flexible fitting of structural...") (current)
- 10:33, 10 June 2021 (diff | hist) . . (+84) . . Main Page (→Fitting and docking)
- 08:58, 1 June 2021 (diff | hist) . . (+1,597) . . N 2008Rusu Interpolation (Created page with "== Citation == Rusu, M.; Birmanns, S. & Wriggers, W. Biomolecular pleiomorphism probed by spatial interpolation of coarse models. Bioinformatics, 2008, 24, 2460-2466 == Abs...") (current)
- 08:57, 1 June 2021 (diff | hist) . . (+120) . . Main Page (→Fitting and docking)
- 10:14, 27 May 2021 (diff | hist) . . (+2,034) . . N 2021Glaeser Fading (Created page with "== Citation == Glaeser, R. M.; Hagen, W. J.; Han, B.-G.; Henderson, R.; McMullan, G. & Russo, C. J. Defocus-dependent Thon-ring fading. Ultramicroscopy, 2021, 222, 113213...") (current)
- 10:09, 27 May 2021 (diff | hist) . . (+75) . . Main Page (→Image formation)
- 09:36, 27 May 2021 (diff | hist) . . (+1,968) . . N 2020Oroguchi (Created page with "== Citation == Oroguchi, T.; Oide, M.; Wakabayashi, T. & Nakasako, M. Assessment of Force Field Accuracy Using Cryogenic Electron Microscopy Data of Hyper-thermostable Gl...") (current)
- 09:35, 27 May 2021 (diff | hist) . . (+110) . . Main Page (→Fitting and docking)
- 09:26, 27 May 2021 (diff | hist) . . (+1,686) . . N 2021Beckers Interpretation (Created page with "== Citation == Beckers, M.; Mann, D. & Sachse, C. Structural interpretation of cryo-EM image reconstructions. Progress in biophysics and molecular biology, 2021, 160, 26-...") (current)
- 09:23, 27 May 2021 (diff | hist) . . (+113) . . Main Page (→Sharpening of high resolution information)
- 09:13, 27 May 2021 (diff | hist) . . (+1,631) . . N 2021Pfab DeepTracer (Created page with "== Citation == Pfab, J.; Phan, N. M. & Si, D. DeepTracer for fast de novo cryo-EM protein structure modeling and special studies on CoV-related complexes. PNAS, 2021, 118...") (current)
- 09:11, 27 May 2021 (diff | hist) . . (+104) . . Main Page (→Fitting and docking)
- 08:54, 27 May 2021 (diff | hist) . . (+1,506) . . N 2020Stabrin Transphire (Created page with "== Citation == Stabrin, M.; Schoenfeld, F.; Wagner, T.; Pospich, S.; Gatsogiannis, C. & Raunser, S. TranSPHIRE: automated and feedback-optimized on-the-fly processing for...") (current)
- 08:53, 27 May 2021 (diff | hist) . . (+123) . . Main Page (→Automated data collection)
- 08:27, 27 May 2021 (diff | hist) . . (+2,008) . . N 2020Nakane Atomic (Created page with "== Citation == Nakane, T.; Kotecha, A.; Sente, A.; McMullan, G.; Masiulis, S.; Brown, P. M.; Grigoras, I. T.; Malinauskaite, L.; Malinauskas, T.; Miehling, J. & others. S...") (current)
- 08:26, 27 May 2021 (diff | hist) . . (+84) . . Main Page (→Books and reviews)
- 08:18, 27 May 2021 (diff | hist) . . (+1,426) . . N 2020Tan ThroughGrid (Created page with "== Citation == Tan, Y. Z. & Rubinstein, J. L. Through-grid wicking enables high-speed cryoEM specimen preparation. Acta Crystallographica Section D: Structural Biology, 2...") (current)
- 08:14, 27 May 2021 (diff | hist) . . (+110) . . Main Page (→Sample preparation)
- 08:09, 27 May 2021 (diff | hist) . . (+1,890) . . N 2021Abrishami Localized (Created page with "== Citation == Abrishami, V.; Ilca, S. L.; Gomez-Blanco, J.; Rissanen, I.; de la Rosa-Trevín, J. M.; Reddy, V. S.; Carazo, J.-M. & Huiskonen, J. T. Localized reconstruct...") (current)
- 08:05, 27 May 2021 (diff | hist) . . (+143) . . Main Page (→3D Reconstruction)
- 07:57, 27 May 2021 (diff | hist) . . (+1,316) . . N 2021Punjani 3DVA (Created page with "== Citation == Punjani, A. & Fleet, D. J. 3D Variability Analysis: Resolving continuous flexibility and discrete heterogeneity from single particle cryo-EM. J. Structural Bio...") (current)
- 07:56, 27 May 2021 (diff | hist) . . (+74) . . Main Page (→3D Heterogeneity)
- 11:24, 26 May 2021 (diff | hist) . . (+1,964) . . N 2021Baldwin SCF (Created page with "== Citation == Baldwin, P. R. & Lyumkis, D. Tools for visualizing and analyzing Fourier space sampling in Cryo-EM. Progress in Biophysics and Molecular Biology, 2021, 160...") (current)
- 11:21, 26 May 2021 (diff | hist) . . (+84) . . Main Page (→Software)
- 11:15, 26 May 2021 (diff | hist) . . (+1,918) . . N 2020Bepler TopazDenoise (Created page with "== Citation == Bepler, T.; Kelley, K.; Noble, A. J. & Berger, B. Topaz-Denoise: general deep denoising models for cryoEM and cryoET. Nature communications, 2020, 11, 5208...") (current)
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