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- 1999Volkmann Fitting
- 2000Baumeister Review
- 2000Bohm Template
- 2000DeRosier EwaldCorrection
- 2000Engel AFM
- 2000He PhaseAlignment
- 2000Jensen TiltedCorrection
- 2000Tao Review
- 2000Thuman Review
- 2000VanHeel Review
- 2001Baker Review
- 2001Brandt Automatic1
- 2001Brandt Automatic2
- 2001Dimmeler AFM
- 2001Ellis Review
- 2001Frangakis NAD
- 2001Glaeser Review
- 2001Jones Review
- 2001Nicholson Review
- 2001Saad CTFEstimate
- 2001Sorzano Uneven
- 2001Zhang Automatic
- 2001Zhu Filaments
- 2002DeCarlo Damage
- 2002Fernandez reconstruction
- 2002Frangakis Eigenanalysis
- 2002Frangakis Template
- 2002Frank Review
- 2002Hsieh Sample
- 2002Penczek SSNR
- 2002Schmid Review
- 2002Volkmann Watershed
- 2003Bajaj BoundarySegmentation
- 2003Boutselakis EMSD
- 2003Cong FRM2D
- 2003Fernandez AND
- 2003Huang CTFEstimate
- 2003Jiang Bilateral
- 2003Koster Review
- 2003Kovacs FRM3D
- 2003Lee Review
- 2003Ludtke FocusPairs
- 2003Mindell CTFTILT
- 2003Mobus EnergyLoss
- 2003Navaza Review
- 2003Rosenthal DPR
- 2003Sali Review
- 2003Sander MSA
- 2003Velazquez ARMA
- 2003Winkler CTF
- 2003Ziese Automatic
- 2004AlAmoudi Sample
- 2004Egerton Damage
- 2004Henderson Review
- 2004Leapman EnergyLoss
- 2004Leapman Review
- 2004Marabini ART
- 2004Potter Automatic
- 2004Sigworth Detection
- 2004Sorzano IDR
- 2004Sorzano Normalization
- 2004Sorzano Wavelet
- 2004Sorzano Xmipp
- 2004Subramaniam Review
- 2004Tama NMA1
- 2004Tama NMA2
- 2004Volkmann ParticlePicking
- 2004Wan CTF
- 2004White Size
- 2004Wong ParticlePicking
- 2004Zheng Automatic
- 2004Zhu Review
- 2004Zubelli Chahine
- 2005Boudier EFTETJ
- 2005Cardone Resolution
- 2005Cong FRM2D
- 2005Cyrklaff Thresholding
- 2005Dubowy SpaceVariant
- 2005Fernandez AND
- 2005Heymann Conventions
- 2005Jonic Splines
- 2005Lanzavecchia Conical
- 2005Lei Automatic
- 2005Lucic Review
- 2005Mallick ACE
- 2005Nickell TOM
- 2005Scheres ML2D
- 2005Scheres Virus
- 2005Sorzano Parameters
- 2005Steven Review
- 2005Suloway Automatic
- 2005Unser SSNR
- 2005VanHeel FSC
- 2005Velazquez Superfamilies
- 2005Vestergaard SAXS
- 2005Wang Iterative
- 2005Yang Simultaneous
- 2005Zampighi Conical
- 2006Baker segmentation
- 2006Castano alignment