User contributions for WikiSysop

8 August 2023

• 06:5506:55, 8 August 2023 diff hist +1,983 N 2023Kinman Analysis Created page with "== Citation == Kinman, Laurel F. / Powell, Barrett M. / Zhong, Ellen D. / Berger, Bonnie / Davis, Joseph H. Uncovering structural ensembles from single-particle cryo-EM data..." current
• 06:5506:55, 8 August 2023 diff hist +102 Main Page →3D Heterogeneity

7 August 2023

• 06:2806:28, 7 August 2023 diff hist +1,492 N 2023Amann TimeResolved Created page with "== Citation == Amann, Sascha Josef / Keihsler, Demian / Bodrug, Tatyana / Brown, Nicholas G. / Haselbach, David. Frozen in time: analyzing molecular dynamics with time-resolv..." current
• 06:2706:27, 7 August 2023 diff hist +74 Main Page →Books and reviews
• 06:2206:22, 7 August 2023 diff hist +2,375 N 2022Burley PDB Created page with "== Citation == Burley, Stephen K. / Berman, Helen M. / Chiu, Wah / Dai, Wei / Flatt, Justin W. / Hudson, Brian P. / Kaelber, Jason T. / Khare, Sagar D. / Kulczyk, Arkadiusz W..." current
• 06:2106:21, 7 August 2023 diff hist +78 Main Page →Books and reviews
• 06:1106:11, 7 August 2023 diff hist +2,034 N 2023Kim Ptolemy Created page with "== Citation == Kim, Paul T. / Noble, Alex J. / Cheng, Anchi / Bepler, Tristan. Learning to automate cryo-electron microscopy data collection with Ptolemy. 2023. IUCrJ, Vol. 1..." current
• 06:1006:10, 7 August 2023 diff hist +72 Main Page →Automated data collection

26 July 2023

• 13:3513:35, 26 July 2023 diff hist +2,711 N 2023Cheng Leginon Created page with "== Citation == Cheng, Anchi / Kim, Paul T. / Kuang, Huihui / Mendez, Joshua H. / Chua, Eugene Y. D. / Maruthi, Kashyap / Wei, Hui / Sawh, Anjelique / Aragon, Mahira F. / Serb..." current
• 13:3413:34, 26 July 2023 diff hist +74 Main Page →Automated data collection

25 July 2023

• 10:1410:14, 25 July 2023 diff hist +1,852 N 2023Liu AWI Created page with "== Citation == Liu, Nan / Wang, Hong-Wei. Better Cryo-EM Specimen Preparation: How to Deal with the Air--Water Interface? 2023, J. Molecular Biology, Vol. 435, No. 9, p. 1679..." current
• 10:1310:13, 25 July 2023 diff hist +66 Main Page →Books and reviews
• 09:5809:58, 25 July 2023 diff hist +1,558 N 2023Schreiber charge Created page with "== Citation == Schreiber, Makoto Tokoro / Maigné, Alan / Beleggia, Marco / Shibata, Satoshi / Wolf, Matthias. Temporal dynamics of charge buildup in cryo-electron microscopy..." current
• 09:5309:53, 25 July 2023 diff hist +74 Main Page →Image formation
• 09:1109:11, 25 July 2023 diff hist +1,482 N 2023Seifer RevisedSaxton Created page with "== Citation == Seifer, Shahar. Sampling theory perspective on tomographic tilt increment schemes. 2023. Ultramicroscopy, Vol. 245, p. 113669 == Abstract == Given a limited..." current
• 09:1009:10, 25 July 2023 diff hist +98 Main Page →Collection geometry
• 07:5907:59, 25 July 2023 diff hist +2,104 N 2022Zhang DRVAE Created page with "== Citation == Zhang, Dongxu / Yan, Yang / Huang, Yulin / Liu, Bowen / Zheng, Qingbing / Zhang, Jun / Xia, Ningshao. Unsupervised Cryo-EM Images Denoising and Clustering base..." current
• 07:5807:58, 25 July 2023 diff hist +88 Main Page →2D Classification and clustering

24 July 2023

• 09:0809:08, 24 July 2023 diff hist +1,710 N 2023Terashi DAQrefine Created page with "== Citation == Terashi, Genki / Wang, Xiao / Kihara, Daisuke. Protein model refinement for cryo-EM maps using AlphaFold2 and the DAQ score. 2023. Acta Crystallographica Secti..." current
• 09:0709:07, 24 July 2023 diff hist +92 Main Page →Fitting and docking
• 08:4208:42, 24 July 2023 diff hist +1,526 N 2023Zheng Ultraflat Created page with "== Citation == Zheng, Liming / Liu, Nan / Gao, Xiaoyin / Zhu, Wenqing / Liu, Kun / Wu, Cang / Yan, Rui / Zhang, Jincan / Gao, Xin / Yao, Yating / others. Uniform thin ice on..." current
• 08:4108:41, 24 July 2023 diff hist +85 Main Page →Sample preparation

20 July 2023

• 07:5707:57, 20 July 2023 diff hist +1,472 N 2022Bouvette SmartScope Created page with "== Citation == Bouvette, Jonathan / Huang, Qinwen / Riccio, Amanda A. / Copeland, William C. / Bartesaghi, Alberto / Borgnia, Mario J. Automated systematic evaluation of cryo..." current
• 07:5507:55, 20 July 2023 diff hist +56 Main Page →Automated data collection

19 July 2023

• 06:5606:56, 19 July 2023 diff hist +1,653 N 2023Tang Reweighting Created page with "== Citation == Tang, Wai Shing / Silva-Sánchez, David / Giraldo-Barreto, Julian / Carpenter, Bob / Hanson, Sonya M. / Barnett, Alex H. / Thiede, Erik H. / Cossio, Pilar. Ens..." current
• 06:5406:54, 19 July 2023 diff hist +87 Main Page →3D Heterogeneity
• 06:4406:44, 19 July 2023 diff hist +1,422 N 2023Sharon Enhancement Created page with "== Citation == Sharon, Guy / Shkolnisky, Yoel / Bendory, Tamir. Signal enhancement for two-dimensional cryo-EM data processing. 2023. Biological Imaging, Vol. 3, p. e7 == A..." current
• 06:4306:43, 19 July 2023 diff hist +81 Main Page →2D Preprocessing
• 06:2906:29, 19 July 2023 diff hist +1,430 N 2022Wang Thunder Created page with "== Citation == Wang, Zhao / Ruan, Huabin / Yang, Guangwen / Li, Xueming. Parallelizing the cryo-EM structure determination in THUNDER using GPU cluster. 2022. Engineering Rep..." current
• 06:2806:28, 19 July 2023 diff hist +79 Main Page →3D Alignment

18 July 2023

• 07:1307:13, 18 July 2023 diff hist +1,220 N 2022Guaita Review Created page with "== Citation == Guaita, Margherita / Watters, Scott C. / Loerch, Sarah. Recent advances and current trends in cryo-electron microscopy. 2022. Current opinion in structural bio..." current
• 07:1207:12, 18 July 2023 diff hist +101 Main Page →Books and reviews
• 07:0807:08, 18 July 2023 diff hist +1,211 N 2022Metskas STA Created page with "== Citation == Metskas, Lauren Ann / Wilfong, Rosalie / Jensen, Grant J. Subtomogram averaging for biophysical analysis and supramolecular context. 2022. J. Structural Biolog..." current
• 07:0607:06, 18 July 2023 diff hist +78 Main Page →Subtomogram analysis

4 July 2023

• 14:0914:09, 4 July 2023 diff hist −1 Main Page →Image alignment
• 14:0514:05, 4 July 2023 diff hist +1,622 N 2022Zheng Aretomo Created page with "== Citation == Zheng, Shawn / Wolff, Georg / Greenan, Garrett / Chen, Zhen / Faas, Frank G. A. / Bárcena, Montserrat / Koster, Abraham J. / Cheng, Yifan / Agard, David A. Ar..." current
• 14:0414:04, 4 July 2023 diff hist +89 Main Page →Image alignment
• 13:5513:55, 4 July 2023 diff hist +1,476 N 2022Liedtke Review Created page with "== Citation == Liedtke, Janine / Depelteau, Jamie S. / Briegel, Ariane. How advances in cryo-electron tomography have contributed to our current view of bacterial cell biolog..." current
• 13:5413:54, 4 July 2023 diff hist +96 Main Page →Books and reviews
• 13:4913:49, 4 July 2023 diff hist +1,336 N 2022Donnat GAN Created page with "== Citation == Donnat, Claire / Levy, Axel / Poitevin, Frederic / Zhong, Ellen D. / Miolane, Nina. Deep generative modeling for volume reconstruction in cryo-electron microsc..." current
• 13:4813:48, 4 July 2023 diff hist +87 Main Page →Books and reviews

28 June 2023

• 09:0209:02, 28 June 2023 diff hist +3,038 N 2022Urzhumtsev Direct Created page with "== Citation == Urzhumtsev, Alexandre G. / Urzhumtseva, Ludmila M. / Lunin, Vladimir Y. Direct calculation of cryo-EM and crystallographic model maps for real-space refinement..." current
• 09:0009:00, 28 June 2023 diff hist +90 Main Page →Fitting and docking
• 08:3508:35, 28 June 2023 diff hist +1,855 N 2022Beton Fitting Created page with "== Citation == Beton, Joseph George / Cragnolini, Tristan / Kaleel, Manaz / Mulvaney, Thomas / Sweeney, Aaron / Topf, Maya. Integrating model simulation tools and cryo-electr..." current
• 08:3408:34, 28 June 2023 diff hist +63 Main Page →Books and reviews
• 07:3707:37, 28 June 2023 diff hist +1,690 N 2023Heymann Ewald Created page with "== Citation == Heymann, J. Bernard. The Ewald sphere/focus gradient does not limit the resolution of cryoEM reconstructions. 2023. J. Structural Biology: X, Vol. 7, p. 100083..." current
• 07:3607:36, 28 June 2023 diff hist +127 Main Page →Image formation
• 07:1707:17, 28 June 2023 diff hist +1,783 N 2022Sorzano Validation Created page with "== Citation == Sorzano, C. O. S. / Vilas, J. L. / Ram\irez-Aportela, Erney / Krieger, J. / Del Hoyo, D. / de Isidro-Gómez, F. / Herreros, David / Fernandez-Giménez, Estrell..." current
• 07:0807:08, 28 June 2023 diff hist +81 Main Page →Validation

26 June 2023

• 09:1009:10, 26 June 2023 diff hist +1,649 N 2022Liu Isonet Created page with "== Citation == Liu, Yun-Tao / Zhang, Heng / Wang, Hui / Tao, Chang-Lu / Bi, Guo-Qiang / Zhou, Z. Hong. Isotropic reconstruction for electron tomography with deep learning. 20..." current