User contributions for WikiSysop

27 February 2019

• 05:5305:53, 27 February 2019 diff hist +1,034 N 2019Chreifi TiltSeries Created page with "== Citation == Chreifi, G.; Chen, S.; Metskas, L. A.; Kaplan, M. & Jensen, G. J. Rapid tilt-series acquisition for electron cryotomography. Journal of structural biology, 201..." current
• 05:5205:52, 27 February 2019 diff hist +102 Main Page →Automated data collection
• 05:4805:48, 27 February 2019 diff hist +1,851 N 2019Ramlaul Filtering Created page with "== Citation == Ramlaul, K.; Palmer, C. M., Aylett, C. H. S. A Local Agreement Filtering Algorithm for Transmission EM Reconstructions. Journal of structural biology, 2019, 2..." current
• 05:4705:47, 27 February 2019 diff hist +81 Main Page →Sharpening of high resolution information
• 05:3605:36, 27 February 2019 diff hist +2,455 N 2019Zhang Pixer Created page with "== Citation == Zhang, J.; Wang, Z.; Chen, Y.; Han, R.; Liu, Z.; Sun, F. Zhang, F. PIXER: an automated particle-selection method based on segmentation using a deep neural netw..." current
• 05:3505:35, 27 February 2019 diff hist +71 Main Page →Automatic particle picking

4 February 2019

• 21:0821:08, 4 February 2019 diff hist +973 N 2018Noble Reducing Created page with "== Citation == Noble, A. J.; Wei, H.; Dandey, V. P.; Zhang, Z.; Tan, Y. Z.; Potter, C. S. and Carragher, B. Reducing effects of particle adsorption to the air-water interface..." current
• 21:0721:07, 4 February 2019 diff hist +68 Main Page →Sample preparation

31 January 2019

• 07:5007:50, 31 January 2019 diff hist +1,696 N 2018Kovacs Medium Created page with "== Citation == Kovacs, J. A.; Galkin, V. E. & Wriggers, W. Accurate flexible refinement of atomic models against medium-resolution cryo-EM maps using damped dynamics. BMC..." current
• 07:4907:49, 31 January 2019 diff hist +78 Main Page →Fitting and docking
• 07:4307:43, 31 January 2019 diff hist +881 N 2018Sieben Multicolor Created page with "== Citation == Sieben, C.; Banterle, N.; Douglass, K. M.; Gönczy, P. & Manley, S. Multicolor single-particle reconstruction of protein complexes. Nature methods, 2018, 1..." current
• 07:4207:42, 31 January 2019 diff hist +102 Main Page →Relationship to other structural information sources
• 07:2907:29, 31 January 2019 diff hist +1,357 N 2018Nakane MultiBody Created page with "== Citation == Nakane, T.; Kimanius, D.; Lindahl, E. & Scheres, S. H. Characterisation of molecular motions in cryo-EM single-particle data by multi-body refinement in RE..." current
• 07:2807:28, 31 January 2019 diff hist +95 Main Page →3D Heterogeneity
• 07:1707:17, 31 January 2019 diff hist +1,723 N 2018Jonic Gaussian Created page with "== Citation == Jonić, S. A methodology using Gaussian-based density map approximation to assess sets of cryo-electron microscopy density maps. Journal of structural biology,..." current
• 07:1607:16, 31 January 2019 diff hist +97 Main Page →Validation
• 06:5206:52, 31 January 2019 diff hist +1,332 N 2018Cianfrocco cloud Created page with "== Citation == Cianfrocco, M. A.; Lahiri, I.; DiMaio, F. and Leschziner, A. E. cryoem-cloud-tools: A software platform to deploy and manage cryo-EM jobs in the cloud. Journal..." current
• 06:5106:51, 31 January 2019 diff hist +61 Main Page →Software
• 06:4806:48, 31 January 2019 diff hist +1,992 N 2018Gewering Detergents Created page with "== Citation == Gewering, T.; Januliene, D.; Ries, A. B. and Moeller, A. Know your detergents: A case study on detergent background in negative stain electron microscopy. Jour..." current
• 06:4606:46, 31 January 2019 diff hist +83 Main Page →Sample preparation
• 06:4106:41, 31 January 2019 diff hist +1,430 N 2018Rice Ice Created page with "== Citation == Rice, W. J.; Cheng, A.; Noble, A. J.; Eng, E. T.; Kim, L. Y.; Carragher, B. and Potter, C. S. Routine determination of ice thickness for cryo-EM grids. Journal..." current
• 06:4006:40, 31 January 2019 diff hist +72 Main Page →Sample preparation
• 06:3206:32, 31 January 2019 diff hist +1,973 N 2019Han Dual Created page with "== Citation == Han, R.; Wan, X.; Li, L.; Lawrence, A.; Yang, P.; Li, Y.; Wang, S.; Sun, F.; Liu, Z.; Gao, X. & Zhang, F. AuTom-dualx: a toolkit for fully automatic fiduci..." current
• 06:3006:30, 31 January 2019 diff hist +97 Main Page →Image alignment
• 06:2806:28, 31 January 2019 diff hist +717 N 2018Scapin DrugDiscovery Created page with "== Citation == Scapin, G.; Potter, C. S. & Carragher, B. Cryo-EM for Small Molecules Discovery, Design, Understanding, and Application. Cell chemical biology, 2018, 25, 1..." current
• 06:2706:27, 31 January 2019 diff hist +88 Main Page →Books and reviews

17 January 2019

• 08:1108:11, 17 January 2019 diff hist +1,473 N 2019Thompson Protocol Created page with "== Citation == Thompson, R. F.; Iadanza, M. G.; Hesketh, E. L.; Rawson, S. and Ranson, N. A. Collection, pre-processing and on-the-fly analysis of data for high-resolution, s..." current
• 08:1008:10, 17 January 2019 diff hist +71 Main Page →Automated data collection
• 07:4507:45, 17 January 2019 diff hist +2,248 N 2015Sachse Review Created page with "== Citation == Sachse, C. Single-particle based helical reconstruction-how to make the most of real and Fourier space. AIMS Biophysics, 2015, 2, 219-244 == Abstract == The..." current
• 07:4407:44, 17 January 2019 diff hist +20 Main Page →Books and reviews
• 07:3507:35, 17 January 2019 diff hist +1,662 N 2018Ouyang Denoising Created page with "== Citation == Ouyang, J.; Liang, Z.; Chen, C.; Fu, Z.; Zhang, Y. and Liu, H. Cryo-electron microscope image denoising based on the geodesic distance. BMC structural biology,..." current
• 07:3107:31, 17 January 2019 diff hist +79 Main Page →2D Preprocessing
• 07:2707:27, 17 January 2019 diff hist +2,464 N 2018Ando Correlative Created page with "== Citation == Ando, T. et al. The 2018 correlative microscopy techniques roadmap, J. Physics D: Applied Physics, 2018, 51, 44301 == Abstract == Developments in microscopy..." current
• 07:2307:23, 17 January 2019 diff hist +86 Main Page →Relationship to other structural information sources
• 07:1407:14, 17 January 2019 diff hist +1,553 N 2018Noble ParticleDistribution Created page with "== Citation == Noble, A. J.; Dandey, V. P.; Wei, H.; Brasch, J.; Chase, J.; Acharya, P.; Tan, Y. Z.; Zhang, Z.; Kim, L. Y.; Scapin, G.; Rapp, M.; Eng, E. T.; Rice, W. J.; Che..." current
• 07:1007:10, 17 January 2019 diff hist 0 Main Page →Image formation
• 07:1007:10, 17 January 2019 diff hist +76 Main Page →Image formation

2 January 2019

• 06:5206:52, 2 January 2019 diff hist +1,693 N 2018Su GoCTF Created page with "== Citation == Su, M. goCTF: Geometrically optimized CTF determination for single-particle cryo-EM. Journal of structural biology, 2018, == Abstract == Preferred particle..."
• 06:5006:50, 2 January 2019 diff hist +66 Main Page →CTF estimation and restoration
• 06:4706:47, 2 January 2019 diff hist +1,548 N 2018Heymann Bsoft Created page with "== Citation == Heymann, J. B. Single particle reconstruction and validation using Bsoft for the map challenge. Journal of structural biology, 2018, 204, 90-95 == Abstract =..." current
• 06:4606:46, 2 January 2019 diff hist +66 Main Page →Validation
• 06:4206:42, 2 January 2019 diff hist +2,025 N 2018Heymann Challenge Created page with "== Citation == Heymann, J. B.; Marabini, R.; Kazemi, M.; Sorzano, C. O. S.; Holmdahl, M.; Mendez, J. H.; Stagg, S. M.; Jonic, S.; Palovcak, E.; Armache, J.-P.; Zhao, J.; Chen..." current
• 06:4006:40, 2 January 2019 diff hist +96 Main Page →Validation
• 06:3506:35, 2 January 2019 diff hist +1,520 N 2018Pintilie SSE Created page with "== Citation == Pintilie, G. and Chiu, W. Assessment of structural features in Cryo-EM density maps using SSE and side chain Z-scores. Journal of structural biology, 2018, 204..." current
• 06:3406:34, 2 January 2019 diff hist +84 Main Page →Validation
• 06:2906:29, 2 January 2019 diff hist +1,210 N 2018Sorzano Highres Created page with "== Citation == Sorzano, C. O. S.; Vargas, J.; de la Rosa-Trev?n, J. M.; Jim?nez-Moreno, A.; Melero, R.; Mart?nez, M.; Conesa, P.; Vilas, J. L.; Marabini, R. and Carazo, J. M...." current
• 06:2606:26, 2 January 2019 diff hist +121 Main Page →3D Reconstruction
• 06:2606:26, 2 January 2019 diff hist +121 Main Page →3D Alignment
• 06:2406:24, 2 January 2019 diff hist +887 N 2018Cheng Review Created page with "== Citation == Cheng, Y. Single-particle cryo-EM-How did it get here and where will it go. Science, 2018, 361, 876-880 == Abstract == Cryo-electron microscopy, or simply c..." current
• 06:2306:23, 2 January 2019 diff hist +68 Main Page →Books and reviews