User contributions for WikiSysop

16 April 2019

• 05:4705:47, 16 April 2019 diff hist +77 Main Page →2D Classification and clustering
• 05:4505:45, 16 April 2019 diff hist +2,081 N 2018Levin Kam Created page with "== Citation == Levin, E.; Bendory, T.; Boumal, N.; Kileel, J. & Singer, A. 3D ab initio modeling in cryo-EM by autocorrelation analysis. Proc. IEEE 15th Int. Symp. Biomedical..." current
• 05:4305:43, 16 April 2019 diff hist +88 Main Page →3D Reconstruction
• 05:3205:32, 16 April 2019 diff hist +1,495 N 2019Bonomi Multiscale Created page with "== Citation == Bonomi, M.; Hanot, S.; Greenberg, C. H.; Sali, A.; Nilges, M.; Vendruscolo, M. & Pellarin, R. Bayesian Weighing of Electron Cryo-Microscopy Data for Integrativ..." current
• 05:3105:31, 16 April 2019 diff hist +74 Main Page →Fitting and docking
• 05:1705:17, 16 April 2019 diff hist +2,458 N 2019Wang Biobjective Created page with "== Citation == Wang, W. L.; Yu, Z.; Castillo-Menendez, L. R.; Sodroski, J. & Mao, Y. Robustness of signal detection in cryo-electron microscopy via a bi-objective-function ap..." current
• 05:1605:16, 16 April 2019 diff hist +92 Main Page →Automatic particle picking

29 March 2019

• 17:2217:22, 29 March 2019 diff hist +2,378 N 2019Avramov DeepLearning Created page with "== Citation == Avramov, T. K.; Vyenielo, D.; Gomez-Blanco, J.; Adinarayanan, S.; Vargas, J. & Si, D. Deep Learning for Validating and Estimating Resolution of Cryo-Electron M..." current
• 17:2117:21, 29 March 2019 diff hist +123 Main Page →Resolution
• 17:1417:14, 29 March 2019 diff hist +1,594 N 2019Fernandez residual Created page with "== Citation == Fernandez, J.-J.; Li, S. & Agard, D. A. Consideration of sample motion in cryo-tomography based on alignment residual interpolation. Journal of structural biol..." current
• 17:1117:11, 29 March 2019 diff hist +98 Main Page →Image alignment

27 March 2019

• 14:4814:48, 27 March 2019 diff hist +1,335 N 2018Vilas MonoRes Created page with "== Citation == Jose Luis Vilas, Josué Gómez-Blanco, Pablo Conesa, Roberto Melero, José Miguel de la Rosa-Trevín, Joaquin Otón, Jesús Cuenca, Roberto Marabini, José Mar..." current
• 14:4614:46, 27 March 2019 diff hist +77 Main Page →Resolution

26 March 2019

• 22:2422:24, 26 March 2019 diff hist +1,752 N 2019Havelkova Regularization Created page with "== Citation == Havelkova, E. Regularization methods for discrete inverse problems arising in single particle analysis. Fac. Mathematics and Physics, Charles University, Fac...." current
• 22:2322:23, 26 March 2019 diff hist +95 Main Page →3D Reconstruction
• 22:1622:16, 26 March 2019 diff hist +1,148 N 2009Rose Optics Created page with "== Citation == Rose, H. Geometrical Charged-Particle Optics. Springer, 2009 == Abstract == This reference monograph covers all theoretical aspects of modern geometrical cha..." current
• 22:1522:15, 26 March 2019 diff hist +72 Main Page →Image formation

25 March 2019

• 07:1407:14, 25 March 2019 diff hist +1,773 N 2019Zivanov BayesianBIM Created page with "== Citation == Zivanov, J.; Nakane, T. & Scheres, S. H. W. A Bayesian approach to beam-induced motion correction in cryo-EM single-particle analysis. IUCrJ, 2019 , 6 , 5-17..." current
• 07:1307:13, 25 March 2019 diff hist +90 Main Page →2D Preprocessing
• 07:0907:09, 25 March 2019 diff hist +965 N 2018Michels RBF Created page with "== Citation == Michels, Y.; Baudrier, E.; Mazo, L. Radial Function Based Ab-Initio Tomographic Reconstruction for Cryo Electron Microscopy, 25th IEEE Intl. Conf. on Image Pro..." current
• 07:0807:08, 25 March 2019 diff hist +95 Main Page →3D Reconstruction
• 07:0407:04, 25 March 2019 diff hist −92 Main Page →Fitting and docking
• 07:0107:01, 25 March 2019 diff hist +92 Main Page →Fitting and docking

27 February 2019

• 05:5305:53, 27 February 2019 diff hist +1,034 N 2019Chreifi TiltSeries Created page with "== Citation == Chreifi, G.; Chen, S.; Metskas, L. A.; Kaplan, M. & Jensen, G. J. Rapid tilt-series acquisition for electron cryotomography. Journal of structural biology, 201..." current
• 05:5205:52, 27 February 2019 diff hist +102 Main Page →Automated data collection
• 05:4805:48, 27 February 2019 diff hist +1,851 N 2019Ramlaul Filtering Created page with "== Citation == Ramlaul, K.; Palmer, C. M., Aylett, C. H. S. A Local Agreement Filtering Algorithm for Transmission EM Reconstructions. Journal of structural biology, 2019, 2..." current
• 05:4705:47, 27 February 2019 diff hist +81 Main Page →Sharpening of high resolution information
• 05:3605:36, 27 February 2019 diff hist +2,455 N 2019Zhang Pixer Created page with "== Citation == Zhang, J.; Wang, Z.; Chen, Y.; Han, R.; Liu, Z.; Sun, F. Zhang, F. PIXER: an automated particle-selection method based on segmentation using a deep neural netw..." current
• 05:3505:35, 27 February 2019 diff hist +71 Main Page →Automatic particle picking

4 February 2019

• 21:0821:08, 4 February 2019 diff hist +973 N 2018Noble Reducing Created page with "== Citation == Noble, A. J.; Wei, H.; Dandey, V. P.; Zhang, Z.; Tan, Y. Z.; Potter, C. S. and Carragher, B. Reducing effects of particle adsorption to the air-water interface..." current
• 21:0721:07, 4 February 2019 diff hist +68 Main Page →Sample preparation

31 January 2019

• 07:5007:50, 31 January 2019 diff hist +1,696 N 2018Kovacs Medium Created page with "== Citation == Kovacs, J. A.; Galkin, V. E. & Wriggers, W. Accurate flexible refinement of atomic models against medium-resolution cryo-EM maps using damped dynamics. BMC..." current
• 07:4907:49, 31 January 2019 diff hist +78 Main Page →Fitting and docking
• 07:4307:43, 31 January 2019 diff hist +881 N 2018Sieben Multicolor Created page with "== Citation == Sieben, C.; Banterle, N.; Douglass, K. M.; Gönczy, P. & Manley, S. Multicolor single-particle reconstruction of protein complexes. Nature methods, 2018, 1..." current
• 07:4207:42, 31 January 2019 diff hist +102 Main Page →Relationship to other structural information sources
• 07:2907:29, 31 January 2019 diff hist +1,357 N 2018Nakane MultiBody Created page with "== Citation == Nakane, T.; Kimanius, D.; Lindahl, E. & Scheres, S. H. Characterisation of molecular motions in cryo-EM single-particle data by multi-body refinement in RE..." current
• 07:2807:28, 31 January 2019 diff hist +95 Main Page →3D Heterogeneity
• 07:1707:17, 31 January 2019 diff hist +1,723 N 2018Jonic Gaussian Created page with "== Citation == Jonić, S. A methodology using Gaussian-based density map approximation to assess sets of cryo-electron microscopy density maps. Journal of structural biology,..." current
• 07:1607:16, 31 January 2019 diff hist +97 Main Page →Validation
• 06:5206:52, 31 January 2019 diff hist +1,332 N 2018Cianfrocco cloud Created page with "== Citation == Cianfrocco, M. A.; Lahiri, I.; DiMaio, F. and Leschziner, A. E. cryoem-cloud-tools: A software platform to deploy and manage cryo-EM jobs in the cloud. Journal..." current
• 06:5106:51, 31 January 2019 diff hist +61 Main Page →Software
• 06:4806:48, 31 January 2019 diff hist +1,992 N 2018Gewering Detergents Created page with "== Citation == Gewering, T.; Januliene, D.; Ries, A. B. and Moeller, A. Know your detergents: A case study on detergent background in negative stain electron microscopy. Jour..." current
• 06:4606:46, 31 January 2019 diff hist +83 Main Page →Sample preparation
• 06:4106:41, 31 January 2019 diff hist +1,430 N 2018Rice Ice Created page with "== Citation == Rice, W. J.; Cheng, A.; Noble, A. J.; Eng, E. T.; Kim, L. Y.; Carragher, B. and Potter, C. S. Routine determination of ice thickness for cryo-EM grids. Journal..." current
• 06:4006:40, 31 January 2019 diff hist +72 Main Page →Sample preparation
• 06:3206:32, 31 January 2019 diff hist +1,973 N 2019Han Dual Created page with "== Citation == Han, R.; Wan, X.; Li, L.; Lawrence, A.; Yang, P.; Li, Y.; Wang, S.; Sun, F.; Liu, Z.; Gao, X. & Zhang, F. AuTom-dualx: a toolkit for fully automatic fiduci..." current
• 06:3006:30, 31 January 2019 diff hist +97 Main Page →Image alignment
• 06:2806:28, 31 January 2019 diff hist +717 N 2018Scapin DrugDiscovery Created page with "== Citation == Scapin, G.; Potter, C. S. & Carragher, B. Cryo-EM for Small Molecules Discovery, Design, Understanding, and Application. Cell chemical biology, 2018, 25, 1..." current
• 06:2706:27, 31 January 2019 diff hist +88 Main Page →Books and reviews

17 January 2019

• 08:1108:11, 17 January 2019 diff hist +1,473 N 2019Thompson Protocol Created page with "== Citation == Thompson, R. F.; Iadanza, M. G.; Hesketh, E. L.; Rawson, S. and Ranson, N. A. Collection, pre-processing and on-the-fly analysis of data for high-resolution, s..." current